Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq223 87.8 1e-12
>seq223
Length=82600
Score = 87.8 bits (96), Expect = 1e-12
Identities = 106/142 (75%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 42970 CCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA-TCAACTC 43028
|| |||||||| || || |||||||| | || | |||||| || || |||| | |
Sbjct 42068 CCAGCAAAAATTAAACGTTGTTGATCAGGTGGAATACCTTCCTTATC-CTGAATTTTGGC 42126
Query 43029 TTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAG 43088
||| || | ||| ||||| | ||| || || | |||||| |||||||||||||
Sbjct 42127 TTTCACGTTTTCAATAGTGTCCGACGGCTCCACTTCCAGCGTTATTGTTTTTCCGGTTAA 42186
Query 43089 AGTTTTCACAAAAATTTGCATT 43110
||||||||||||||||||||||
Sbjct 42187 AGTTTTCACAAAAATTTGCATT 42208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381350283153048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |