Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_004305.1 Length=42259 Score E Sequences producing significant alignments: (Bits) Value seq1599 89.7 1e-13 >seq1599 Length=6876 Score = 89.7 bits (98), Expect = 1e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2594 GCGAGTGTAGTTTAGTGGTAAAACGATAGCCTTCCAAGCTGTAGTCGCGGGTCCGATTCC 2653 ||| |||||||||||||||||||| | ||||||||||||||| |||||| || |||||| Sbjct 6487 GCGGGTGTAGTTTAGTGGTAAAACTACAGCCTTCCAAGCTGTTGTCGCGAGTTCGATTCT 6546 Query 2654 CGTCACTCACTT 2665 |||||| | ||| Sbjct 6547 CGTCACCCGCTT 6558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135100532121912