Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_004305.1
Length=42259
Score E
Sequences producing significant alignments: (Bits) Value
seq1599 89.7 1e-13
>seq1599
Length=6876
Score = 89.7 bits (98), Expect = 1e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2594 GCGAGTGTAGTTTAGTGGTAAAACGATAGCCTTCCAAGCTGTAGTCGCGGGTCCGATTCC 2653
||| |||||||||||||||||||| | ||||||||||||||| |||||| || ||||||
Sbjct 6487 GCGGGTGTAGTTTAGTGGTAAAACTACAGCCTTCCAAGCTGTTGTCGCGAGTTCGATTCT 6546
Query 2654 CGTCACTCACTT 2665
|||||| | |||
Sbjct 6547 CGTCACCCGCTT 6558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 135100532121912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |