Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_004745.1
Length=30728
Score E
Sequences producing significant alignments: (Bits) Value
seq1103 82.4 1e-11
>seq1103
Length=13301
Score = 82.4 bits (90), Expect = 1e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 14943 CAACAGGCAGAATCACAAAAGGCCGCGTTACTTTCCGAAGCGGAAAGCGTTATTCAGCCA 15002
|||| ||| |||||||| ||| |||| || ||| |||||||||| || || | |||
Sbjct 2849 CAACTGGCGGAATCACAGAAGACCGCTTTGCTTACCGAAGCGGAGTCTGTCATCCGGCCG 2790
Query 15003 CTGGAGCGCGCTGTCAGGCTGAACATGGCAACAGATGA 15040
| || ||| |||||||||||||||| || ||| |||||
Sbjct 2789 CCGGGGCGTGCTGTCAGGCTGAACAGGGAAACGGATGA 2752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 98203153189680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |