Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value seq1627 2143 0.0 seq1947 857 0.0 seq974 320 7e-83 seq1066 284 5e-72 seq3035 242 1e-59 >seq1627 Length=6655 Score = 2143 bits (2376), Expect = 0.0 Identities = 1265/1316 (96%), Gaps = 0/1316 (0%) Strand=Plus/Minus Query 56231 CGAAAGTGAACCGCCCCGGTTTTCCTGGAGAGTGTTTTATCTGTGAACTCAGGCTGCCAG 56290 || || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1380 CGCAACTGAACCGCCCCGGGTTTCCTGGAGAGTGTTTTATCTGTGAACTCAGGCTGCCAG 1321 Query 56291 ATCATCGTTTCCGATGGAAGCATAATAAGCTTTTTCTGCTTCTGCCGGAGGAGTATGGCC 56350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1320 ATCATCGTTTCCGATGGAAGCATAATAAGCTTTTTCTGCTTCTGCCGGAGGAGTATGGCC 1261 Query 56351 CAGCCTTCCCAGCAATCGTCGATTGTTATACCAGTCCACCCACGTTAGTGTGGCCAGTTC 56410 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1260 CAGCCTTTCCAGCAATCGTCGATTGTTATACCAGTCCACCCACGTGAGTGTGGCCAGTTC 1201 Query 56411 CACTTCTGCACGGTTTTTCCAGCTCTTACGGTGTATTACCTCCGCTTTGTAAAGACCATT 56470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1200 CACTTCTGCACGGTTTTTCCAGCTCTTACGGTGTATTACCTCCGCTTTGTAAAGACCATT 1141 Query 56471 GATGCTCTCAGCCATCGCGTTGTCATACGAGTCGCCTGTACTCCCTGTTGATGCCAGTAA 56530 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1140 GATGCTCTCCGCCATCGCGTTGTCATACGAGTCGCCTGTACTTCCTGTTGATGCCAGTAA 1081 Query 56531 TCCGGCTTCTTTTAGTCGCTCCGTATAGGCCAGTGACACATACTGAGAGCCTTTATCGCT 56590 ||||||||| || || |||| || |||||||| || ||||||||||| |||||||| || Sbjct 1080 TCCGGCTTCCTTAAGCCGCTGTGTGTAGGCCAGCGATACATACTGAGAACCTTTATCACT 1021 Query 56591 GTGATGGATGGTGCCAGACGGACGACGGGCCCACAACGCCTGCTCCAGCGCATCCAGCAC 56650 |||||||| ||||| ||||| ||||||||||| |||||||||||||| ||||||||||| Sbjct 1020 GTGATGGACCGTGCCGGACGGTCGACGGGCCCATAACGCCTGCTCCAGTGCATCCAGCAC 961 Query 56651 GAATGTCGTTTCCATAGACGATGAGACCCGCCACCCCACGATGTATCCGGCAAACACATC 56710 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 960 GAATGTCGTTTCCATGGACGATGAGACCCGCCACCCCACGATGTATCCGGCAAACACATC 901 Query 56711 AATGATAAACGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCCAC 56770 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 900 AATGATGAACGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCCAC 841 Query 56771 CCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGGTTTACGCGGTCGCCTGCGGCAAC 56830 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 840 CCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGGTTTACGCGGTCGCCTGCGGCAAC 781 Query 56831 GGCTTTCCGGCTGATGGTCGTACGGACCTTTTTACCCCGGAGAACACCGGCAAGTCCCAT 56890 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 GGCTTTCCGGCTGATGGTCGTACGGACCTTTTTACCCCGGAGAACACCGGCAAGTCCCAT 721 Query 56891 AACCGCCATGAGACGTGCCACTGTACATCTGGCCACCCTGATTCCTTCCCGTAACAACTG 56950 ||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||| Sbjct 720 AACCGCCATGAGACGTGCCACAGTGCATCTGGCCACTCTGATACCTTCCCGTAACAACTG 661 Query 56951 ACGCCAGACTTTACGCACACCGTACACCTGATGATTTTCATCGTATACGCGCTGTATCTC 57010 |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 660 ACGCCAGACTTTACGCACACCGTATACCTTGTGATTTTCATCGTATACGCGCTGTATCTC 601 Query 57011 TCTCTTCAGCCAGTCGTCGTGCTGCGCACGGGCACTGCGTTTATCCGGATGATGTCGCTG 57070 | ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct 600 TTTCTTCAGCCAGTCATCGCGCTGCGCACGGGCACTGCGTTTATCCGGATGATGTCGCTG 541 Query 57071 TTGCTGACAATGGTAATACGTTGACGGGGCAATATGCAGTTCGCTGCATACCGGTCCGAC 57130 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 540 TTGCTGACAGTGGTAATACGTTGACGGGGCAATATGCAGTTCGCTGCATAGCGGTCCGAC 481 Query 57131 CCCGTACTGCTCACGCAGCTTATCCAGCAGTGGCATCATTTTTTCCAGAGGCGGTCGAAC 57190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 CCCGTACTGCTCACGCAGCTTATCCAGCAGTGGCATCATTTTTTCCAGAGGCGGTCGAAC 421 Query 57191 TCCGCCTTCGCAAAATAAGCGGAAGCCTGGCGAAGGATATCGTTACTGCGGCGCAGTTCA 57250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 420 TCCGCCTTCGCAAAATAAGCGGAAGCCTGGCGAAGGATATCGTTACTGCGGCGCAGTTCA 361 Query 57251 CGATTTTCACGTTCCAGCTCTTTCAGACGCTGACGTTCAGCGCTGGTGAGCCCACCATCA 57310 ||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 360 CGATTTTCACGCTCCAGCTCTTTCAGACGCTGACGTTCAGCGGTGGTGAGCCCTCCATCA 301 Query 57311 CCGCCCCCGGTATCCCGCTCATGCTGGCGAACCCAGACACGCAGAGTCTCCGGCGTACAG 57370 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 300 CCGCCCCCGGTATCCCGCTCATGCTGGCGAACCCAGACACGCAGAGTCTCCGGCGTACAG 241 Query 57371 CCAATCTTTGGGGCAATGGAACAAATTGCCGCCCACTGTGAGTCATATTCATCCTGACTT 57430 ||||||||||| |||||||||||||||| |||||| |||||||||||||| |||||||| Sbjct 240 CCAATCTTTGGAGCAATGGAACAAATTGTCGCCCATTGTGAGTCATATTCGCCCTGACTT 181 Query 57431 TCCAGAACCATACGAATCGCCCGCTGACGGACTTCGGGGGAAAAACGAGTATTTTTAGTC 57490 |||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| Sbjct 180 TCCAGAACCATACGGACTGCCCGTTGACGGACTTCGGGGGAAAAACGAGTATTTTTAGTC 121 Query 57491 ATCCTGTTTACCTCTTTCTCAGGGAGTTTAGTCTCCAGGATTTCCGGGGCGGTTCA 57546 ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| Sbjct 120 ATCCTGTTTACCTCTTTCTCAGGAAGTTTAGTCTCCAGGATTCCCGGGGCGGTTCA 65 >seq1947 Length=4488 Score = 857 bits (950), Expect = 0.0 Identities = 499/515 (97%), Gaps = 0/515 (0%) Strand=Plus/Minus Query 57032 CTGCGCACGGGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTGACAATGGTAATACGT 57091 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 4488 CTGCGCACGGGCACTGCGTTTATCCGGATGATGTCGCTGTTGCTGACAGTGGTAATACGT 4429 Query 57092 TGACGGGGCAATATGCAGTTCGCTGCATACCGGTCCGACCCCGTACTGCTCACGCAGCTT 57151 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 4428 TGACGGGGCAATATGCAGTTCGCTGCATAGCGGTCCGACCCCGTACTGCTCACGCAGCTT 4369 Query 57152 ATCCAGCAGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCG 57211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4368 ATCCAGCAGTGGCATCATTTTTTCCAGAGGCGGTCGAACTCCGCCTTCGCAAAATAAGCG 4309 Query 57212 GAAGCCTGGCGAAGGATATCGTTACTGCGGCGCAGTTCACGATTTTCACGTTCCAGCTCT 57271 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 4308 GAAGCCTGGCGAAGGATATCGTTACTGCGGCGCAGTTCACGATTTTCACGCTCCAGCTCT 4249 Query 57272 TTCAGACGCTGACGTTCAGCGCTGGTGAGCCCACCATCACCGCCCCCGGTATCCCGCTCA 57331 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct 4248 TTCAGACGCTGACGTTCAGCGGTGGTGAGCCCTCCATCACCGCCCCCGGTATCCCGCTCA 4189 Query 57332 TGCTGGCGAACCCAGACACGCAGAGTCTCCGGCGTACAGCCAATCTTTGGGGCAATGGAA 57391 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 4188 TGCTGGCGAACCCAGACACGCAGAGTCTCCGGCGTACAGCCAATCTTTGGAGCAATGGAA 4129 Query 57392 CAAATTGCCGCCCACTGTGAGTCATATTCATCCTGACTTTCCAGAACCATACGAATCGCC 57451 ||||||| |||||| |||||||||||||| |||||||||||||||||||||| | ||| Sbjct 4128 CAAATTGTCGCCCATTGTGAGTCATATTCGCCCTGACTTTCCAGAACCATACGGACTGCC 4069 Query 57452 CGCTGACGGACTTCGGGGGAAAAACGAGTATTTTTAGTCATCCTGTTTACCTCTTTCTCA 57511 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4068 CGTTGACGGACTTCGGGGGAAAAACGAGTATTTTTAGTCATCCTGTTTACCTCTTTCTCA 4009 Query 57512 GGGAGTTTAGTCTCCAGGATTTCCGGGGCGGTTCA 57546 || |||||||||||||||||| ||||||||||||| Sbjct 4008 GGAAGTTTAGTCTCCAGGATTCCCGGGGCGGTTCA 3974 >seq974 Length=15858 Score = 320 bits (354), Expect = 7e-83 Identities = 560/810 (69%), Gaps = 4/810 (0%) Strand=Plus/Minus Query 32026 TCAGGCATCCATGCACCATAAACATTGTAGACCATGCTGGCGCTGGAGTGCCCCATCTGT 32085 |||| ||||||||| || || |||||| | ||||| ||| || | ||||||||||| Sbjct 809 TCAGTCATCCATGCTCCGTATACATTGAACACCATCTGGGCACTTGCATGCCCCATCTGG 750 Query 32086 GATGCAATAAATGTCGGGTTTGCTCCGGAAGATAAAGCCCAGCACGCATAGGTATGGCGT 32145 ||||| || | ||||||||||||| |||||| | |||||||||||| || || ||| Sbjct 749 CTGGCAATGAAGCTTGGGTTTGCTCCGGCAGATAATGACCAGCACGCATAAGTGTGTCGT 690 Query 32146 GACTGATACGCTTTACGGGATCGGATACCCGCTCTTTTTATTGCTGAATCCCATGTCGCT 32205 ||||| || ||||| ||| | ||| ||||| | || || |||| ||||||| | Sbjct 689 GACTGGTATGCTTTCCGGTGCCTGATGCCCGCACGCTTAATGGCTGTTTCCCATGAGTCG 630 Query 32206 CCGATGGAGCTTACCGCGTAGTTAATACCCGCCT-TGTGATTCTTGCGAACGATTTGCGG 32264 || ||||| |||| |||| ||| ||| ||| | || || || | ||| | || || Sbjct 629 CCAATGGAATCTACCTTGTAGATAAAACCTACCTGTTTGCTT-TTTCTAACCACCTGGGG 571 Query 32265 ACAGAAAACAAAAGTGCACTCGTGCAAAATTGTTCTTCCGTACTCGCGTAATTGAACAGT 32324 || || ||||| || || || | || | ||| || || |||| |||||| | Sbjct 570 GTTAAATACGAAAGTACATTCATGATTCACTGAACGTCCATATTCACGTAGTTGAACCTT 511 Query 32325 GATCTGATGCTGCCTGCTAAGACGAGTAAGCATCGCCTGGTTTTTAAGTGCTTCAATTGC 32384 ||| || |||||| | | || | || | ||||| ||||| || | || || Sbjct 510 GATGTGGTGCTGCTTACCCAGTCTTGTCATTTCAGCCTGATTTTTCAGGACACTGATAGC 451 Query 32385 TGGTGCCAGAAGATGTATAACCCGGTTAGTGCCTGCGTCGGTCTTTGGTAGCGTAAAATC 32444 || | |||||| | ||||| ||| || | ||| || || || ||||| || || || Sbjct 450 GGGCTGGATAAGATGCACAACCCTGTTTGTACTTGCTTCAGTTTTAGGTAGAGTGAACTC 391 Query 32445 ACCTATTTTTGTAAAATTTCGTCGCACTGTTATCGTGCCAGCTTTCAGGTCGATATCCTC 32504 ||| | ||| ||| |||| || | | || || || || |||||||| |||||||| || Sbjct 390 ACCGAGTTTCGTATAATTGCGCCTGATAGTAATAGTTCCTGCTTTCAGATCGATATCTTC 331 Query 32505 CCATGCAAGTGCGGCAATTTCACCGTGTCGCATCCCTGTAAAAACAGCCACTGTCCAGAG 32564 ||| || || | | | | ||||||||| ||||| ||||| | ||||||| || ||| || Sbjct 330 CCAGGCCAGGGAGACCAGTTCACCGTGACGCATTCCTGTGTACACAGCCAATGACCACAG 271 Query 32565 GTTTTTGGTCTGTTGATGATGGCAGGCATCAATGAGACGGCTAAACTCATCTCTGGTCAG 32624 |||||| ||||| ||||| |||| ||||| || || || |||| || || | || || Sbjct 270 GTTTTTCGTCTGCTGATGTCGGCAAGCATCTATCAGGCGAATAAATTCGTCACGAGTTAG 211 Query 32625 TGGATCCGGCACTGGTTTTGATTTCCTCAGCGGTGTTATTGAATTAAACGGGTTTTTCTC 32684 ||||| ||| ||| | | | | | || || | ||| | || || ||| || Sbjct 210 CGGATCTGGCTCTGCCCTGGCTCTTTTAAGAGGCTTAATTCCCTGGAAGGGATTTGCTTC 151 Query 32685 CAGATACCCGTTTTCGGCGGCAAAGCTG-AACATTCCGGCTGTTGTTGTCATGTAATAGT 32743 | || |||| || || ||||| ||| |||||||| || |||| ||||||||||| | Sbjct 150 TAAGTAACCGTGATCTGCAGCAAA-CTGAAACATTCCAGCGATTGTCGTCATGTAATAAT 92 Query 32744 TCACTGTGGGTACGGTTCTTCCTTTTCGGGACGTGCTGGTTTTCCTGCTTCCCTTTTCCC 32803 | || || ||| | | ||||||| | | || ||||| | || | || Sbjct 91 TTACAGTAACGACGCTCCGTCCTTTTGCTGCTGCTTTGTTTTTCGTTGAATTCTGATACC 32 Query 32804 CGGTCAGTAAATCTTTCCTGATAAACAGCA 32833 ||||||| ||||||||||||||| |||||| Sbjct 31 CGGTCAGCAAATCTTTCCTGATATACAGCA 2 >seq1066 Length=13853 Score = 284 bits (314), Expect = 5e-72 Identities = 250/313 (80%), Gaps = 8/313 (3%) Strand=Plus/Minus Query 52348 GTCAAAGCAGCAATGGCGCTAGGGCGTCGTGCAATTGGCGTTGAGCTGGAGAGCGGGCGT 52407 ||||||||||| |||||||| ||||||||||||||||| || ||||||||| | ||| Sbjct 410 GTCAAAGCAGCGATGGCGCTGGGGCGTCGTGCAATTGGTGTCGAGCTGGAGGCTGAACGT 351 Query 52408 TTTGAGCAGACGGTCAGGGAAGTTCAGAATGTAGTCAGTCAGAACGGATGATATTGCAGG 52467 ||||||||||| | || || || |||||| | |||| ||| | ||||||||| | Sbjct 350 TTTGAGCAGACCGCAAGAGATGTACAGAATTCAATCAGAAAGAGAGAGTGATATTGCTGA 291 Query 52468 ATTAGTTACGTACCGTTATTATCCTGCGCCCGGCCCTTTAGCTCAGTGGTGAGAGCGAGC 52527 ||| || ||| |||||| || || |||||||||||||||||||||||||||||| Sbjct 290 ATTTATTCTGTAACGTTATCATTATGTTATCGGCCCTTTAGCTCAGTGGTGAGAGCGAGC 231 Query 52528 GACTCATAATCGCCAGGTCGCTGGTTCAAATCCAGCAAGGGCCACCATATCACATACCGC 52587 ||||||||||||||||||||||||||||| ||||||||||||||||| ||| | Sbjct 230 GACTCATAATCGCCAGGTCGCTGGTTCAAGTCCAGCAAGGGCCACCA--------ACCAC 179 Query 52588 CATTAGCTCATCGGGACAGAGCGCCAGCCTTCGAAGCTGGCTGCGCGGGGTTCGAGTCCT 52647 || ||||||||| ||| ||||| || ||||| ||| || | | ||| |||||||||||| Sbjct 178 CACTAGCTCATCCGGATAGAGCATCAACCTTCTAAGTTGACGGTGCGAGGTTCGAGTCCT 119 Query 52648 CGATGGCGGTCCA 52660 || ||| || ||| Sbjct 118 CGGTGGTGGGCCA 106 Score = 114 bits (126), Expect = 5e-21 Identities = 116/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 51620 CTGATGCGTGATATCCGGCAGGTTCTTGAGCGCTGGGGGGCATGGGCGGCAAATAACTAT 51679 |||||||||||||| | ||||||||| || ||||||||||||| ||||||||| | Sbjct 3056 CTGATGCGTGATATTCAAATGGTTCTTGAACGTTGGGGGGCATGGGTGGCAAATAATCAC 2997 Query 51680 GAGGATGTTACATGGTCGCCCATTGCTGCCGGATTTAAGGGACTGATCCCCGAAAAAGTA 51739 |||||||| |||||| | ||||||| || ||||||||| | ||||| |||||| Sbjct 2996 GAGGATGTGGAATGGTCATCTGTTGCTGCAGGTTTTAAGGGATTAATCCCTTCGAAAGTA 2937 Query 51740 AAATCACGTCCACAGTGCTGTGACGATGATG 51770 ||||| || || || || | || || |||| Sbjct 2936 AAATCCCGCCCGCAATGTAGCGATGACGATG 2906 Score = 96.9 bits (106), Expect = 1e-15 Identities = 182/264 (69%), Gaps = 4/264 (2%) Strand=Plus/Minus Query 50145 ATGACAAGCATTGAAATCGCTGAGTTGGTGGGAAGCCGTCATGACAAGGTGAAACAATCC 50204 ||||| ||| |||||||||| ||| |||| ||||| | || | ||| || | | ||| Sbjct 9942 ATGACCAGCGTTGAAATCGCAGAGCTGGTTGGAAGTCAACACGGCAATGTCAGAATATCA 9883 Query 50205 ATTGAACGACTGGCGGTTCGAGGTGTGATCCGAAATCCCCCAATGGTGGTTTTCGAAAAA 50264 || || || ||||| || || ||||| | | ||| ||||| | || || Sbjct 9882 ATAGAGCGTCTGGCAAAACGCGGGGTGATTCAACTTCCTGCAATGCAAAAAGTTGAGAAC 9823 Query 50265 -ATCAATAACTTAGG-ATTACTTCGTGGCGTAGAGGCTTACGTTTTTGAGGGCGAACAAG 50322 | |||| | |||| | || | | | | || || |||| || |||||||||| Sbjct 9822 GAACAATCATTTAGCCAAAACAAATTCAC--AAACGCATATATTTTCGAAGGCGAACAAG 9765 Query 50323 GTAAGCGCGACAGCATTATTGTCGTTGCCCAGTTGTCGCCGGAATTCACCGCTCGCCTTG 50382 | || ||||||||||| |||||||| || || | | ||||||||||| || ||||| | Sbjct 9764 GCAAACGCGACAGCATCATTGTCGTCGCACAACTTTGCCCGGAATTCACTGCCCGCCTGG 9705 Query 50383 TTGACCGCTGGCGAGAACTCGAAG 50406 | || || ||||| ||||| |||| Sbjct 9704 TAGATCGTTGGCGCGAACTGGAAG 9681 >seq3035 Length=1767 Score = 242 bits (268), Expect = 1e-59 Identities = 148/157 (94%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 57393 AAATTGCCGCCCACTGTGAGTCATATTCATCCTGACTTTCCAGAACCATACGAATCGCCC 57452 ||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||| Sbjct 217 AAATTGCCGCCCATTGTGAGTCATATTCGCCCTGACTTTCCAGAACCATACGAACTGCCC 276 Query 57453 GCTGACGGACTTCGGGGGAAAAACGAGTATTTTTAGTCATCCTGTTTACCTCTTTCTCAG 57512 | ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 277 GTTGACGGACTTCGGGGGAAAAACGTGTATTTTTAGTCATTCTGTTTACCTCTTTCTCAG 336 Query 57513 GGAGTTTAGTCTCCAGGATTTCCGGGGCGGTTCAAAA 57549 || |||||||||||||||||||||||||||||||||| Sbjct 337 GGCGTTTAGTCTCCAGGATTTCCGGGGCGGTTCAAAA 373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200524242681972