Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_005344.1
Length=39043
Score E
Sequences producing significant alignments: (Bits) Value
seq1947 603 2e-168
>seq1947
Length=4488
Score = 603 bits (668), Expect = 2e-168
Identities = 336/337 (99%), Gaps = 0/337 (0%)
Strand=Plus/Plus
Query 32879 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTTTCCGAT 32938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3637 TGAAGTGGTCAACAAAAACTGGCCACCGAGTTAGAGTTTTTCCAGTATCGATTTTCCGAT 3696
Query 32939 TCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCACTGTAATATCCAACG 32998
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3697 TCGTTTGGGGGTAACCCACCGTTATATTCGTGCGGTCTTAGTGCGCTGTAATATCCAACG 3756
Query 32999 ATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCGGCATC 33058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3757 ATATAGTCCGTTATGGCGTGAGCTGCCTCGCTGAAGCTTACGTAACCCACCACCGGCATC 3816
Query 33059 CATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCG 33118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3817 CATTCGTTCTTCAGACTCCTGAAGAAGCGTTCCATTGGGCTGTTATCCCAGCAGTTTCCG 3876
Query 33119 CGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTC 33178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3877 CGCCGGCTCATACTCTGTCTGATCTGGTATCGCCACAATAACTGCCGGAACTGCCTGCTC 3936
Query 33179 GTATAATGACTGCCCTGATCGCTGTGGAACATCACCC 33215
|||||||||||||||||||||||||||||||||||||
Sbjct 3937 GTATAATGACTGCCCTGATCGCTGTGGAACATCACCC 3973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124809840018360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |