Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_008364.1
Length=26537
Score E
Sequences producing significant alignments: (Bits) Value
seq729 127 3e-25
>seq729
Length=25020
Score = 127 bits (140), Expect = 3e-25
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 4703 TTTACTTTAGCCGTAAACCGTAACTATAAAAACGACCAAGGACAACGCGAAGCCGACTTT 4762
||||||||||| || || ||||| | || || | || | ||||| || || |||
Sbjct 1241 TTTACTTTAGCTGTGAATCGTAATTTTACGAATCAAAGCGGGAATCGCGAGGCGGATTTT 1182
Query 4763 ATTAATGTTGTAATCTGGCGAAAGCAAGCCGAATTATTGGCACAGTATGCAACTAAAGGG 4822
|| ||| |||||| ||||| || ||| ||| || || | ||||| |||||
Sbjct 1181 ATCAATTGTGTAATTTGGCGGAAATCAGCAGAAACTTTAGCTAATTATGCGCGCAAAGGA 1122
Query 4823 GCTTTAATTGGAATTACGGGACGTATTCAAACAAGAAACTATGAAAATCAACAAGGTCAA 4882
|| | | || | || || ||||| ||||||||||| ||||||||||| ||||| |||
Sbjct 1121 ACTCTTTTAGGTGTGACTGGCCGTATCCAAACAAGAAATTATGAAAATCAGCAAGGGCAA 1062
Query 4883 CGTATTTATGTAACCGAAGTTGTAGCCGATAACTTCCAATTATTAGAA 4930
||| | ||||| || |||||||| || || || ||||||||||| |||
Sbjct 1061 CGTGTCTATGTGACAGAAGTTGTTGCTGAGAATTTCCAATTATTGGAA 1014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 84795925042000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |