Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq223 84.2 2e-11
>seq223
Length=82600
Score = 84.2 bits (92), Expect = 2e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 114242 ACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTG 114301
||| ||| |||| ||||||||||| ||||||||||||||||| || || ||| || |
Sbjct 43776 ACCTGCGAAGATTAGACGCTGTTGATCCGGAGGAATGCCTTCCTTATCTTGAATTTTATT 43835
Query 114302 TTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAG 114361
|| | | ||||| | ||| | | || || || | || | ||||| || || ||
Sbjct 43836 CTTCACATTTTCAATTGAGTCAGACGGCTCAACTTCAAGCGTAATGGTTTTTCCCGTGAG 43895
Query 114362 AGTTTTTACAAAAATCTGCATGGCTT 114387
||||| || ||||||||||| ||||
Sbjct 43896 CGTTTTCACGAAAATCTGCATTGCTT 43921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420113119667472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |