Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_009018.1
Length=38528
Score E
Sequences producing significant alignments: (Bits) Value
seq729 140 8e-29
>seq729
Length=25020
Score = 140 bits (154), Expect = 8e-29
Identities = 163/220 (74%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 7062 GTTTACTTTAGCAGTTAATCGTAATTTTAAAAATCAAGATGGACAAAAAGAAGCTGATTT 7121
|||||||||||| || ||||||||||||| |||||| || | || || |||||
Sbjct 1242 GTTTACTTTAGCTGTGAATCGTAATTTTACGAATCAAAGCGGGAATCGCGAGGCGGATTT 1183
Query 7122 TATTAATTGTGTGATGTGGCGACAAGCTGCTGAAAATTTAACAAATTGGACTAAAAAGGG 7181
||| |||||||| || ||||| || | || |||| |||| | |||| | || ||
Sbjct 1182 TATCAATTGTGTAATTTGGCGGAAATCAGCAGAAACTTTAGCTAATTATGCGCGCAAAGG 1123
Query 7182 GCATCTGATTGCGATAACAGGCCGCATCCAAACCCGTAACTATGAGAATCAACAAGGTCA 7241
||| | | | || ||||| |||||||| | || ||||| ||||| ||||| ||
Sbjct 1122 AACTCTTTTAGGTGTGACTGGCCGTATCCAAACAAGAAATTATGAAAATCAGCAAGGGCA 1063
Query 7242 ACGTGTTTATGTGACAGAAGTTGTTGCTGAAAGCTTCCAA 7281
|||||| ||||||||||||||||||||||| | ||||||
Sbjct 1062 ACGTGTCTATGTGACAGAAGTTGTTGCTGAGAATTTCCAA 1023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123161921351280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |