Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_009760.1
Length=218948
Score E
Sequences producing significant alignments: (Bits) Value
seq606 183 4e-41
>seq606
Length=32730
Score = 183 bits (202), Expect = 4e-41
Identities = 200/266 (75%), Gaps = 0/266 (0%)
Strand=Plus/Minus
Query 164082 TTTACTGCTGTTTTCAACTCTTTACCAGCTTTGAATGCCGGTACTTTTGTTGCAGCAATT 164141
|| ||||| ||| | | ||||||| | ||||||||| |||||||| |||| | ||||
Sbjct 23511 TTAACTGCATCTTTTAGCGCTTTACCTGGTTTGAATGCAGGTACTTTGCTTGCTGGAATT 23452
Query 164142 TCAATTTCTTCACCAGTTTGTGGGTTACGTCCCTTACGAGCCGCACGGTCACGAGTTTCG 164201
|| ||||||||||||||||||||||||||||| || || |||||||| ||||| |||
Sbjct 23451 TCGATTTCTTCACCAGTTTGTGGGTTACGTCCTTTGCGGGCCGCACGTTCACGTACTTCA 23392
Query 164202 AATGTACCAAAGCCGATTAACTGTACTTTGTTACCTTCTGCTAAAGCGTTTGTGATACCG 164261
|| ||||||||||||| ||||| ||||| | |||||| ||||| |||| | ||||
Sbjct 23391 AAGTTACCAAAGCCGATCAACTGAACTTTTTCACCTTCAGCTAATGCGTCTTGGATAGTT 23332
Query 164262 CCAAATACTGCGTCTACAGCTTTTGTAGCATCCTTTTTAGAGATTTCTGCTGTTTCAGCT 164321
|||||| || || ||||| |||||| || || |||| | || | | | | ||
Sbjct 23331 GAAAATACAGCATCGACAGCAGCTGTAGCGTCTTTCTTAGTTAAGTCAGTAGCTGCTGCA 23272
Query 164322 ACGTGGTTGATTAATTCAGTTTTGTT 164347
|| | | ||| ||||| | ||||||
Sbjct 23271 ACTTTTTCGATCAATTCTGCTTTGTT 23246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 700469208734080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |