Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_009811.2 Length=137619 Score E Sequences producing significant alignments: (Bits) Value seq2058 86.0 6e-12 >seq2058 Length=4046 Score = 86.0 bits (94), Expect = 6e-12 Identities = 71/87 (82%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 29593 TAAGCTGGTCTAGTTGGATTCGAACCAACGTATCACGGAATCAAAATCCGTTGCCTTACC 29652 ||| |||| ||| |||||||||||||||| || | ||| ||||| ||| |||||||||| Sbjct 2622 TAAACTGGGGTAGCTGGATTCGAACCAACGCATGAGGGAGTCAAAGTCCCTTGCCTTACC 2681 Query 29653 GCTTGGCTACAGACCAATAGTACCAAG 29679 ||||||||| | |||||| | |||| Sbjct 2682 GCTTGGCTATACCCCAATAATTACAAG 2708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440229928867040