Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_009815.1
Length=38124
Score E
Sequences producing significant alignments: (Bits) Value
seq729 134 3e-27
>seq729
Length=25020
Score = 134 bits (148), Expect = 3e-27
Identities = 205/292 (70%), Gaps = 0/292 (0%)
Strand=Plus/Minus
Query 34919 TGATGAATCGTGTAGTACTTGTAGGACGATTAACTAAAGACCCTGATTTACGTTACACTC 34978
|||| ||| ||| ||||| || || || ||||| || || ||||||||||| |||||
Sbjct 1324 TGATTAATAATGTTGTACTAGTTGGTCGTTTAACAAAGGATCCTGATTTACGCTACACCG 1265
Query 34979 CAGCCGGCGCGGCTGTTGCGACTTTTACGCTAGCAGTAAATCGTATGTTCACTAATCAAA 35038
|| || | | |||||| || ||||| |||| || ||||||| || || |||||||
Sbjct 1264 CAAATGGTACAGGTGTTGCCACGTTTACTTTAGCTGTGAATCGTAATTTTACGAATCAAA 1205
Query 35039 ACGGAGAACGAGAAGCAGATTTCATTAATTGTGTTGTTTGGCGCAAACCAGCAGAAAACG 35098
||| | || || || ||||| || |||||||| ||||||| ||| |||||||||
Sbjct 1204 GCGGGAATCGCGAGGCGGATTTTATCAATTGTGTAATTTGGCGGAAATCAGCAGAAACTT 1145
Query 35099 TTGCTAATTTCTTGAAGAAAGGAAGCATGGCGGGCGTTGATGGACGTGTTCAAACTCGTA 35158
| ||||||| | ||||||| | || || ||| ||| | ||||| | |
Sbjct 1144 TAGCTAATTATGCGCGCAAAGGAACTCTTTTAGGTGTGACTGGCCGTATCCAAACAAGAA 1085
Query 35159 ATTATGAGGATAACGACGGTAAACGTGTTTTCGTTACTGAGGTAGTTGCTGA 35210
||||||| || | | || ||||||| | || || || || ||||||||
Sbjct 1084 ATTATGAAAATCAGCAAGGGCAACGTGTCTATGTGACAGAAGTTGTTGCTGA 1033
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 121869185154192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |