Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_011269.1
Length=154017
Score E
Sequences producing significant alignments: (Bits) Value
seq1870 89.7 5e-13
seq1599 89.7 5e-13
>seq1870
Length=4832
Score = 89.7 bits (98), Expect = 5e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 90789 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGAA 90848
|||| |||| |||| |||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct 233 CGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAA 174
Query 90849 TCCTGTCACCCCGA 90862
||||||| |||||
Sbjct 173 TCCTGTCTTCCCGA 160
>seq1599
Length=6876
Score = 89.7 bits (98), Expect = 5e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 90789 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGAA 90848
|||| |||| |||| |||| ||||| ||||||||||||||||| ||||||||||||||
Sbjct 1287 CGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGAA 1346
Query 90849 TCCTGTCACCCCGA 90862
||||||| |||||
Sbjct 1347 TCCTGTCTTCCCGA 1360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 492700802863520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |