Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_011335.1
Length=119343
Score E
Sequences producing significant alignments: (Bits) Value
seq53 84.2 2e-11
>seq53
Length=190479
Score = 84.2 bits (92), Expect = 2e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238
||||| | ||||| | || |||| ||||||||||| || | ||||| |||| ||||
Sbjct 95101 CCGTCCCTGCCGGCACGACCCGTCTCCTGATAATAACCTTCGATCGATTTTGGCAAACTG 95042
Query 118239 TGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGTCGAA 118298
| |||||| || || || ||||| || || || |||||||| || || ||||| || |
Sbjct 95041 TTATGTATGACGAAGCGAACGTCCGGCTTGTCAATGCCCATACCAAAGGCTATAGTAGCG 94982
Query 118299 CATATCACT 118307
|| || |||
Sbjct 94981 CAGATAACT 94973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381753462730464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |