Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_011551.1
Length=39867
Score E
Sequences producing significant alignments: (Bits) Value
seq1066 138 3e-28
>seq1066
Length=13853
Score = 138 bits (152), Expect = 3e-28
Identities = 139/178 (78%), Gaps = 2/178 (1%)
Strand=Plus/Plus
Query 29209 CTGTTCCAGTTCTTTCCAACGATCAACCAGGCAAGCCGTAAATTCAGGGCAAAGTTGAGC 29268
|| ||||||||| ||||||||| ||||||| || || ||||| ||||||||||| ||
Sbjct 9679 CTCTTCCAGTTCGCGCCAACGATCTACCAGGCGGGCAGTGAATTCCGGGCAAAGTTGTGC 9738
Query 29269 AACAACAATAATGCTGTCACGTTTACCTTGTTCACCTTCAAAAATAAAAACTTCAGTAAA 29328
|| ||||| |||||||| ||||| |||||||| ||||| |||||| | | | || ||
Sbjct 9739 GACGACAATGATGCTGTCGCGTTTGCCTTGTTCGCCTTCGAAAATATATGCGTTTGTGAA 9798
Query 29329 GCGATTTGGGCTATTTGATTGTTTATTCTCAACTTTCTCAGATTG-AGGAAGTTGAAT 29385
||| ||||| |||||||| ||||||||||| | |||| ||||||||||||
Sbjct 9799 TTTGTTTTGGCTAAATGATTGTTCGTTCTCAACTTT-TTGCATTGCAGGAAGTTGAAT 9855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127446509885688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |