Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_012753.1
Length=37184
Score E
Sequences producing significant alignments: (Bits) Value
seq729 98.7 2e-16
>seq729
Length=25020
Score = 98.7 bits (108), Expect = 2e-16
Identities = 166/238 (70%), Gaps = 2/238 (1%)
Strand=Plus/Minus
Query 3636 GCGGTTAACCGTAATTTTAAAGACGCTAACGGAGAA-CGTGAAACAGACTTTATCAATTG 3694
|| || || |||||||||| || | || | ||| || || | || |||||||||||
Sbjct 1232 GCTGTGAATCGTAATTTTAC-GAATCAAAGCGGGAATCGCGAGGCGGATTTTATCAATTG 1174
Query 3695 CGTTATCTGGCGCCAGCAAGCTGAAAATTTGGCTAATTGGGCTAAAAAAGGCGCATTGAT 3754
|| || ||||| | ||| |||| ||| ||||||| || ||||| | | |
Sbjct 1173 TGTAATTTGGCGGAAATCAGCAGAAACTTTAGCTAATTATGCGCGCAAAGGAACTCTTTT 1114
Query 3755 TGGAATTACTGGACGCATCCAGACACGTAGCTATGAAAACCAACAGGGTCAACGAGTGTA 3814
|| | ||||| || ||||| ||| | | |||||||| || || || ||||| || ||
Sbjct 1113 AGGTGTGACTGGCCGTATCCAAACAAGAAATTATGAAAATCAGCAAGGGCAACGTGTCTA 1054
Query 3815 TGTAACAGAGGTTGTCGCTGAAAATTTTCAAATGCTAGAAAGTCGTGCAGCTCGTGAA 3872
||| ||||| ||||| ||||| ||||| ||| | | ||| |||| | || |||||
Sbjct 1053 TGTGACAGAAGTTGTTGCTGAGAATTTCCAATTATTGGAATCTCGTACTGCAAGTGAA 996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 118861333606512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |