Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_013645.1
Length=34882
Score E
Sequences producing significant alignments: (Bits) Value
seq729 105 1e-18
>seq729
Length=25020
Score = 105 bits (116), Expect = 1e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 29287 GACTTTATCAATTGCGTTATCTGGAGACAGCAAGCTGAAAACTTGGCTAACTGGGCTAAG 29346
|| ||||||||||| || || ||| | | ||| |||| || ||||| | ||
Sbjct 1187 GATTTTATCAATTGTGTAATTTGGCGGAAATCAGCAGAAACTTTAGCTAATTATGCGCGC 1128
Query 29347 AAAGGAGCATTGATTGGTATTACTGGACGTATTCAGACTCGTAGCTATGAAAATCAACAA 29406
|||||| | | | ||| | ||||| ||||| || || | | ||||||||||| |||
Sbjct 1127 AAAGGAACTCTTTTAGGTGTGACTGGCCGTATCCAAACAAGAAATTATGAAAATCAGCAA 1068
Query 29407 GGTCAACGTGTTTACGTGACTGAAGTTGTTGCTGAAAACTTCCAGATGTTGGAAAGTCGT 29466
|| |||||||| || ||||| |||||||||||||| || ||||| | |||||| ||||
Sbjct 1067 GGGCAACGTGTCTATGTGACAGAAGTTGTTGCTGAGAATTTCCAATTATTGGAATCTCGT 1008
Query 29467 GCAGCGCGTGA 29477
| || ||||
Sbjct 1007 ACTGCAAGTGA 997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 111495297156768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |