Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq63 87.8 3e-12
>seq63
Length=178715
Score = 87.8 bits (96), Expect = 3e-12
Identities = 101/136 (74%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255
|||||| || ||||||| || | || ||| |||| ||| ||| | | ||||| |||
Sbjct 173558 CTGAAATTCGCCGGACAAAACTCTCCGCGTGTACAGATTGGATGTGTACGCTTCGATCGC 173499
Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315
||||||||||| || || ||||| ||| || || ||||| ||||| | |||| ||
Sbjct 173498 TTCGTTGTTGCCCAATATTTGAGCTGTGGACGCAGTTGGCATAGGAGCAACAAGCAACGA 173439
Query 204316 GTTGCGCACACCGTAT 204331
||||||||||| |||
Sbjct 173438 ATTGCGCACACCATAT 173423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795113891687360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |