Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq223 82.4 9e-11 >seq223 Length=82600 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 46451 TTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTC 46510 || |||||||| |||| |||||| ||||||| || | | |||||| || || ||| Sbjct 41783 TTACCGGCGAAAATCAGGCGCTGTTGGTCGGGTGGTATCCCCTCCTTATCTTGAATTTTC 41842 Query 46511 TTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTC 46570 |||| | || | | ||| || || || || |||| ||||| |||||||| || Sbjct 41843 GTCTTTACGTTCTCGATCGTATCCGACGGCTCGACTTCCAGGGTGATTGTTTTGCCAGTT 41902 Query 46571 AGCGTTTTAACAAAGATTTGCAT 46593 || ||||| |||||||||||||| Sbjct 41903 AGAGTTTTCACAAAGATTTGCAT 41925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565209035865120