Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_013797.1
Length=108592
Score E
Sequences producing significant alignments: (Bits) Value
seq223 82.4 5e-11
>seq223
Length=82600
Score = 82.4 bits (90), Expect = 5e-11
Identities = 109/150 (73%), Gaps = 1/150 (1%)
Strand=Plus/Plus
Query 39572 ATTGTTTC-CCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCAT 39630
|||| ||| || |||||||||| ||||||||||| | || | |||||||||||| |
Sbjct 42343 ATTGATTCACCAGCAAAAATTAATCGCTGCTGATCAGGTGGAATGCCTTCTTTGTCTTGT 42402
Query 39631 ATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTA 39690
|||||| ||||| | | | ||||||| ||||| || | || ||||||||
Sbjct 42403 ATTTTTGTTTTAACGTTTTCAATGGTGTCTGACGGCTCCACTTCGAGGGTGATTGTTTTT 42462
Query 39691 CCCGTTAAAGTTTTTACGAAGATCTGCATG 39720
|| || | ||||| ||||| || ||||||
Sbjct 42463 CCAGTAAGCGTTTTAACGAATATTTGCATG 42492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 347352005295548
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |