Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_014662.1
Length=165540
Score E
Sequences producing significant alignments: (Bits) Value
seq2084 86.0 7e-12
>seq2084
Length=3937
Score = 86.0 bits (94), Expect = 7e-12
Identities = 85/108 (79%), Gaps = 4/108 (4%)
Strand=Plus/Plus
Query 69941 TGGTGGGAATAACTGGACTCGAACCAGTGACCTAACGATTATCGGTCGTTTGCTCTA-CC 69999
||||||| || ||||||||||||| ||||| ||||||||| ||||| ||||||| ||
Sbjct 2523 TGGTGGGCCAAAATGGACTCGAACCATCGACCTCACGATTATCAGTCGTGTGCTCTAGCC 2582
Query 70000 AACTGAGCTATATTCCCTGAATTTGGTGGGGAGTGATGGAGTCGAACC 70047
| ||||||||| ||| || |||||| || | | ||| |||||||
Sbjct 2583 AGCTGAGCTATTGGCCC---ATGTGGTGGAGATTAAGGGAATCGAACC 2627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 529572487280000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |