Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq2084 86.0 7e-12 >seq2084 Length=3937 Score = 86.0 bits (94), Expect = 7e-12 Identities = 85/108 (79%), Gaps = 4/108 (4%) Strand=Plus/Plus Query 69941 TGGTGGGAATAACTGGACTCGAACCAGTGACCTAACGATTATCGGTCGTTTGCTCTA-CC 69999 ||||||| || ||||||||||||| ||||| ||||||||| ||||| ||||||| || Sbjct 2523 TGGTGGGCCAAAATGGACTCGAACCATCGACCTCACGATTATCAGTCGTGTGCTCTAGCC 2582 Query 70000 AACTGAGCTATATTCCCTGAATTTGGTGGGGAGTGATGGAGTCGAACC 70047 | ||||||||| ||| || |||||| || | | ||| ||||||| Sbjct 2583 AGCTGAGCTATTGGCCC---ATGTGGTGGAGATTAAGGGAATCGAACC 2627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529572487280000