Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_015263.1
Length=114768
Score E
Sequences producing significant alignments: (Bits) Value
seq413 118 8e-22
>seq413
Length=48931
Score = 118 bits (130), Expect = 8e-22
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 56095 TTTATCTACCACAGGAAAATGAAGCAATTAATGATAAGTCAGGATATGCAAACTCTGTAA 56154
||||| |||||||||||||||||| ||||||||||| |||| ||||| || | |
Sbjct 7723 TTTATTTACCACAGGAAAATGAAGGGATTAATGATAAATCAGCGTATGCTGACAGTAAGA 7782
Query 56155 TGATTGCAGAAGCTGATACAAATGAACTATTAAGTTCTGACTTTATTGTAGCTGTCTTAG 56214
|||| || || ||||| | || | || | ||| || || || || | ||||
Sbjct 7783 TGATCGCTCTTGCCGATACCGAAGAGGTTTTGAAAAGTGATTTGATGGTGGCGTTGTTAG 7842
Query 56215 ACGGTGCAACAATTGATGTTGGTGTAGCTAGTGAAATTGGAGTTGCCTATGCTAAAGGCA 56274
| || || ||||||| || |||||| ||||| || || || || || |||||||
Sbjct 7843 ATGGATTGACCATTGATGCAGGCGTAGCTTCCGAAATCGGTGTCGCTTACGCGAAAGGCA 7902
Query 56275 TTCCAGTTATTGGTCTGTATTCAGATTCACGTCAA 56309
|||| |||||||| ||||| ||||||| ||||||
Sbjct 7903 TTCCTGTTATTGGATTGTATACAGATTCTCGTCAA 7937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 367114204264764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |