Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_015274.1
Length=56506
Score E
Sequences producing significant alignments: (Bits) Value
seq663 84.2 8e-12
>seq663
Length=29291
Score = 84.2 bits (92), Expect = 8e-12
Identities = 121/168 (72%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 10413 ATTGAAATTGATGCTGCTTCTAATAATGGGGTAGAAAATGTTCGAAACATTATTGAAGAT 10472
||||||||||| ||||| || |||||||| || || | |||| | ||| ||| |
Sbjct 6049 ATTGAAATTGACGCTGCATCAAATAATGGTGTTGATGAAATTCGTGAAATTCGTGATAAA 6108
Query 10473 TCTAGATACAAGTCTATGGACAGCGAGTTC-AAAGTTTACATCATTGACGAGGTTCATAT 10531
|| | ||| | | | || | || ||||||||||||||||| || || |||||
Sbjct 6109 TCAACCTACGCACCAA-GCCGTGCAACTTATAAAGTTTACATCATTGATGAAGTGCATAT 6167
Query 10532 GCTTTCAACCGGAGCATTTAATGCGCTGTTGAAAACATTAGAAGAGCC 10579
||| || || || || |||||||| || |||||||| || ||||| ||
Sbjct 6168 GCTATCGACAGGTGCCTTTAATGCTCTTTTGAAAACGTTGGAAGAACC 6215
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 180688682121696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |