Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_016073.1
Length=157950
Score E
Sequences producing significant alignments: (Bits) Value
seq1066 87.8 2e-12
>seq1066
Length=13853
Score = 87.8 bits (96), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 137450 GGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAGT 137509
||||| |||||||||||| ||||| ||||||||||||| ||||||||||||||||
Sbjct 259 GGCCCTTTAGCTCAGTGGTGAGAGCGAGCGACTCATAATCGCCAGGTCGCTGGTTCAAGT 200
Query 137510 CCAGCCAGGGTCACCA 137525
||||| |||| |||||
Sbjct 199 CCAGCAAGGGCCACCA 184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505285749041600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |