Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_016650.1 Length=48072 Score E Sequences producing significant alignments: (Bits) Value seq544 89.7 2e-13 >seq544 Length=37415 Score = 89.7 bits (98), Expect = 2e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 46648 CGTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTC 46707 ||||| ||||||||||||||||||||||||||| |||| |||||| ||||||||| ||| Sbjct 36889 CGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCTC 36830 Query 46708 CGGGCCTGC 46716 || ||||| Sbjct 36829 CGCCCCTGC 36821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 153701214086448