Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_016653.1
Length=46586
Score E
Sequences producing significant alignments: (Bits) Value
seq544 80.6 8e-11
>seq544
Length=37415
Score = 80.6 bits (88), Expect = 8e-11
Identities = 66/78 (85%), Gaps = 3/78 (4%)
Strand=Plus/Minus
Query 45165 CGTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCT 45224
||||| |||||||| |||||| |||||||||||| |||| |||||| ||||||||| ||
Sbjct 36889 CGTAGTTCAATTGG-TAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCT 36831
Query 45225 CCGGGCCTGCAACAGAAA 45242
||| ||||| ||||||
Sbjct 36830 CCGCCCCTGC--CAGAAA 36815
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 148946248767456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |