Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_016653.1 Length=46586 Score E Sequences producing significant alignments: (Bits) Value seq544 80.6 8e-11 >seq544 Length=37415 Score = 80.6 bits (88), Expect = 8e-11 Identities = 66/78 (85%), Gaps = 3/78 (4%) Strand=Plus/Minus Query 45165 CGTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCT 45224 ||||| |||||||| |||||| |||||||||||| |||| |||||| ||||||||| || Sbjct 36889 CGTAGTTCAATTGG-TAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGTCTCT 36831 Query 45225 CCGGGCCTGCAACAGAAA 45242 ||| ||||| |||||| Sbjct 36830 CCGCCCCTGC--CAGAAA 36815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148946248767456