Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq1599 84.2 7e-12 >seq1599 Length=6876 Score = 84.2 bits (92), Expect = 7e-12 Identities = 65/75 (87%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 3477 AAAGCGGGTAAGCGGATTCGAAC-CGCTGACAACAGCTTGGAAGGCTGCAGTTTTACCTC 3535 ||||||||| | || |||||| ||| |||||||||||||||||||| ||||||||| | Sbjct 6559 AAAGCGGGTGACGAGAATCGAACTCGC-GACAACAGCTTGGAAGGCTGTAGTTTTACCAC 6501 Query 3536 TAAACTATACCCGCA 3550 ||||||| ||||||| Sbjct 6500 TAAACTACACCCGCA 6486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152642066360616