Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq1870 87.8 2e-12 >seq1870 Length=4832 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 73887 TGGTGCCGACACGAGGATTTGAACCCCGGACCCTCTGATTACAAAACAGACGCTCTACCA 73946 || ||||| | |||| |||||||| ||||||||||||||||| |||| ||||||||| Sbjct 505 TGATGCCGGCTAAAGGACTTGAACCCTCGACCCTCTGATTACAAATCAGATGCTCTACCA 564 Query 73947 ACTGAGCTATGACGGCAA 73964 ||||||||| | |||||| Sbjct 565 ACTGAGCTAAGCCGGCAA 582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533242696602720