Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq1066 91.5 1e-13 >seq1066 Length=13853 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 81059 TTCGAAGCCGAACAGGGTAAACGCGACAGCATCGTTGTCGTGGCACAGCTTTCTCCTGAA 81118 ||||||| |||||| || ||||||||||||||| ||||||| ||||| |||| || ||| Sbjct 9780 TTCGAAGGCGAACAAGGCAAACGCGACAGCATCATTGTCGTCGCACAACTTTGCCCGGAA 9721 Query 81119 TTTACCGCACGCCTTGTTGATCGGTGGAGAGAGCTTGA 81156 || || || ||||| || ||||| ||| | || || || Sbjct 9720 TTCACTGCCCGCCTGGTAGATCGTTGGCGCGAACTGGA 9683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330415263206160