Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_018860.1
Length=156176
Score E
Sequences producing significant alignments: (Bits) Value
seq1599 86.0 6e-12
seq295 82.4 8e-11
>seq1599
Length=6876
Score = 86.0 bits (94), Expect = 6e-12
Identities = 54/57 (95%), Gaps = 1/57 (2%)
Strand=Plus/Minus
Query 1358 AGGA-GTGGGATTCGAACCCACGCACGCTTTTACACGCCTAGCGGTTTTCAAGACCG 1413
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 6837 AGGATGTGGGATTCGAACCCACGCACGCTTTTACACGCCTGACGGTTTTCAAGACCG 6781
>seq295
Length=62236
Score = 82.4 bits (90), Expect = 8e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Minus
Query 734 GAATATGGTGGACGGAGTAGGGATCGAACCTACGACACGAGGATTTTCAGCCCTCTGCTC 793
|||| ||||| |||| | || |||||||| | |||||| ||||||||| || ||||||
Sbjct 26014 GAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTC 25955
Query 794 TACCAACTGAGCTATCCG 811
|||| |||||||||||||
Sbjct 25954 TACCGACTGAGCTATCCG 25937
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499609243951360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |