Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq18 100 5e-16 >seq18 Length=263653 Score = 100 bits (110), Expect = 5e-16 Identities = 127/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 26152 GGCATGAACAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGC 26211 |||||||| | ||| ||| |||||||||| || || |||||||| | | || || Sbjct 150529 GGCATGAATTGCGTACTGATGTGCCAATACATAGAATACGTGGCCGATCGTTTGTTGGTT 150588 Query 26212 CAGCTGGGACT-CGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACAT 26270 || ||| ||| || || | |||| | | || ||||||||||||||||||| || Sbjct 150589 GAGTTGG-ACTGCGACAAGATATACAATGCTGAGAATCCGTTCGACTTTATGGAAATGAT 150647 Query 26271 ATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 |||| | ||||| |||||||| |||||||||| | ||| ||||| || ||| Sbjct 150648 ATCGCTTGAAGGTAAGACCAATTTCTTTGAAAGAAAGGTGGGCGAATACCAA 150699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928796546512640