Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_019507.1
Length=182833
Score E
Sequences producing significant alignments: (Bits) Value
seq1870 84.2 3e-11
seq1599 84.2 3e-11
>seq1870
Length=4832
Score = 84.2 bits (92), Expect = 3e-11
Identities = 68/81 (84%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 167466 TGGTCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACC 167525
|| ||||| || ||||||||||||| || ||||||||||||||||||||||| || |||
Sbjct 157 TGATCGGGAAGACAGGATTCGAACCTGCGACCCCTTGGTCCCAAACCAAGTGCTCT-ACC 215
Query 167526 AGACTGCGCTACACCCCGAAA 167546
| ||| ||||| |||||||
Sbjct 216 AAGCTGAGCTACTTCCCGAAA 236
>seq1599
Length=6876
Score = 84.2 bits (92), Expect = 3e-11
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 167469 TCGGGGTGAAAGGATTCGAACCTTCGGCCCCTTGGTCCCAAACCAAGTGCGCTAACCAGA 167528
||||| || ||||||||||||| || ||||||||||||||||||||||| || ||||
Sbjct 1360 TCGGGAAGACAGGATTCGAACCTGCGACCCCTTGGTCCCAAACCAAGTGCTCT-ACCAAG 1302
Query 167529 CTGCGCTACACCCCGAAA 167546
||| ||||| |||||||
Sbjct 1301 CTGAGCTACTTCCCGAAA 1284
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 584907212491680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |