Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_019723.1 Length=47090 Score E Sequences producing significant alignments: (Bits) Value seq1103 6419 0.0 seq1137 96.9 1e-15 >seq1103 Length=13301 Score = 6419 bits (7118), Expect = 0.0 Identities = 4465/5053 (88%), Gaps = 57/5053 (1%) Strand=Plus/Minus Query 12775 GATTAACAACGACGGCACGAACGGGCAGATAGGTCCGGCTGCTCTGAAGGCGGTGTATGA 12834 ||| || |||||||||||||||||||||||||||||||| || ||||||| ||| ||||| Sbjct 11573 GATCAATAACGACGGCACGAACGGGCAGATAGGTCCGGCAGCACTGAAGGTGGTTTATGA 11514 Query 12835 CATGGCCCGCAAGGGTGCCCGTGATGAAATTCAGACA-CAGATGCGTGATGGTGGCCTGT 12893 | | | || | ||| || || || ||| ||| ||||||||||||| || Sbjct 11513 CCTCGGGAAAAAAGCGGCCGCGGACTTTATGCA-ACAGCAGGCCCGTGATGGTGGCCGGT 11455 Query 12894 TCTCCGGAGGTGGACG---ATGAAGACCTTCCGCTGGAAAGTGAAACCCGGTATGGATGT 12950 | |||| || ||| |||| || |||||||| ||| || | |||| |||| Sbjct 11454 TAAGTGGAGCATACCGGTAATGGAGACGTTTCGCTGGAAGGTGCGCCCGGATATGAATGT 11395 Query 12951 GGCTTCGGTCCCTTCTGTAAGAAAGGTGCGCTTTGGTGATGGCTATTCTCAGCGAGCGCC 13010 || || | || || ||| | |||||||| ||| ||||| |||| Sbjct 11394 GGTATCAGAGCCAAAAGTGGTGGCAGTGAAGCTGGGTGATGGTTATGAACAGCGT-CGCC 11336 Query 13011 TGCCGGG-CTGAATGCCAACCTGAAAACGTACAGCGTGACGCTTTCTGTCCCCC---GTG 13066 | |||| |||||| ||| || |||||||||||| | ||| | ||| Sbjct 11335 CGGCGGGACTGAATAATCTGCTGTCGACTTACAGCGTGACGATACGTGTTCGTAAAGGTG 11276 Query 13067 AGGAGGCCACGGTACTGGAGTCGTTTCTGGAAGAGCACGGGGGCTGGAAATCCTTTCTGT 13126 | | |||| | | | | ||||||||| |||||| ||| | |||| || Sbjct 11275 AACAC-CCACCTT--TAAAAGCCTTTCTGGAACGGCACGGTGGCGTCCGCGCATTTCAGT 11219 Query 13127 GGACGCCGCCTTATGAGTGGCGGCAGATAAAGGTGACCTGCGCAAAATGGTCGTCGCGGG 13186 ||||||| |||||||| ||| | ||| | |||| || ||||||||| | | | Sbjct 11218 GGACGCCACCTTATGACTGGAAACCGATCAGGGTGGTTTGTCGTAAATGGTCGGCAAGCG 11159 Query 13187 TCAGTATGCTGCGTGTTGAGTTCAGCG-CAGAGTTTGAACAGGTGGTGAACTGATGCAGG 13245 | | | | | || || | | || | || ||||||||||||||||||||||||||| Sbjct 11158 TGGGGGCGTTATGGGT-GACTGTAACGGCCGATTTTGAACAGGTGGTGAACTGATGCAGG 11100 Query 13246 ATATCCGGCAGGAAACACTGAATGAATGCACCCGTGCGGAGCAGTCGGCCAGCGTGGTGC 13305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11099 ATATCCGGCAGGAAACACTGAATGAATGCACCCGTGCGGAGCAGTCGGCCAGCGTGGTGC 11040 Query 13306 TCTGGGAAATCGACCTGACAGAGGTCGGTGGAGAACGTTATTTTTTCTGTAATGAGCAGA 13365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 11039 TCTGGGAAATCGACCTGACAGAGGTCGGTGGAGAACGTTATTTTTTCTGTAATGAGCAGA 10980 Query 13366 ACGAAAAAGGTGAGCCGGTCACCTGGCAGGGGCGACAGTATCAGCCGTATCCCATTCAGG 13425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10979 ACGAAAAAGGTGAGCCGGTCACCTGGCAGGGGCGACAGTATCAGCCGTATCCCATTCAGG 10920 Query 13426 GGAGCGGTTTTGAACTGAATGGCAAAGGCACCAGTACGCGCCCCACGCTGACGGTTTCTA 13485 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10919 GGAGTGGTTTTGAACTGAATGGCAAAGGCACCAGTACGCGCCCCACGCTGACGGTTTCTA 10860 Query 13486 ACCTGTACGGTATGGTCACCGGGATGGCGGAAGATATGCAGAGTCTGGTCGGCGGAACGG 13545 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 10859 ACCTGTACGGTATGGTCACCGGGATGGCGGAAGATCTGCAGAGTCTGGTCGGCGGAACGG 10800 Query 13546 TGGTCCGGCGTAAGGTTTACGCCCGTTTTCTGGATGCGGTGAACTTCGTCAACGGAAACA 13605 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 10799 TGGTCCGGCGTAAGGTTTACGCCCGTTTTCTTGATGCGGTGAACTTCGTCAACGGAAACA 10740 Query 13606 GTTACGCCGATCCGGAGCAGGAGGTGATCAGCCGCTGGCGCATTGAGCAGTGCAGCGAAC 13665 | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 10739 GAGACGCCGATCCGGAGCAGGAGGTGATCAGCCGCTGGCGCATCGAGCAGTGCAGCGAAC 10680 Query 13666 TGAGCGCGGTGAGTGCCTCCTTTGTACTGTCCACGCCGACGGAAACGGATGGCGCTGTTT 13725 |||||||||| |||||||| ||||| ||| |||| || ||||| ||||||||||| |||| Sbjct 10679 TGAGCGCGGTCAGTGCCTCTTTTGTGCTGGCCACACCAACGGAGACGGATGGCGCGGTTT 10620 Query 13726 TTCCGGGACGTATCATGCTGGCCAACACCTGCACCTGGACCTATCGCGGTGACGAGTGCG 13785 | ||||| |||||||||||||| || ||||| | |||||||| || ||| ||||| | Sbjct 10619 TCCCGGGGCGTATCATGCTGGCGAATACCTGTATGTGGACCTACCGTTCTGATGAGTGTG 10560 Query 13786 GTTATAGCGGTCCGGCTGTCGCGGATGAATATGACCAGCCAACGTCCGATATCACGAAGG 13845 |||| | || ||| || || || || | ||| | |||||| | |||||| ||||| Sbjct 10559 GTTACACGGGCAGGGCAGTGGCTGACGAGTTCGACAAACCAACGACGGATATCCGGAAGG 10500 Query 13846 ATAAATGCAGCAAATGCCTGAGCGGTTGTAAGTTCCGCAATAACGTCGGCAACTTTGGCG 13905 | ||||||||||| || || |||| ||| |||| ||||| || ||| || || |||| Sbjct 10499 ACAAATGCAGCAAGTGTATGCGCGGGTGTGAGTTGCGCAACAATACCGGTAATTTCGGCG 10440 Query 13906 GCTTCCTTTCCATTAACAAACTTTCGCAGTAAATCCCATGACACAGACAGAATCAGCGAT 13965 | ||||||||||| || |||||||| |||||||||| ||||||||||||||||||||||| Sbjct 10439 GTTTCCTTTCCATCAATAAACTTTCTCAGTAAATCC-ATGACACAGACAGAATCAGCGAT 10381 Query 13966 TCTGGCGCACGCCCGGCGATGTGCGCCAGCGGAGTCGTGCGGCTTCGTGGTAAGCACGCC 14025 ||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||| Sbjct 10380 TCTGGCGCACGCCCGGCGATGTGCGCCAGCGGAGTCGTGTGGCTTCGTGGTGAGAACGCC 10321 Query 14026 GGAGGGGGAAAGATATTTCCCCTGCGTGAATATCTCCGGTGAGCCGGAGGCGTATTTCCG 14085 |||||| || || ||| | ||| ||| ||||||||||||||||||||||| ||||| Sbjct 10320 GGAGGGAGACAGGTATCTTCCCAGCGAGAATATCTCCGGTGAGCCGGAGGAACGGTTCCG 10261 Query 14086 TATGTCGCCGGAAGACTGGCTGCAGGCAGAAATGCAGGGTGAGATTGTGGCGCTGGTCCA 14145 ||| | ||||| |||||||||| |||| |||||||||||||||||||||| |||||||| Sbjct 10260 GATGGCTCCGGAGGACTGGCTGCGGGCACAAATGCAGGGTGAGATTGTGGCACTGGTCCA 10201 Query 14146 CAGCCACCCCGGTGGTCTGCCCTGGCTGAGTGAGGCCGACCGGCGGCTGCAGGTGCAGAG 14205 ||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 10200 CAGTCATCCCGGTGGTCTGCCCTGGCTGAGTGAGGCTGACCGGCGGCTGCAGGTGCAGAG 10141 Query 14206 TGATTTGCCGTGGTGGCTGGTCTGCCGGGGGACGATTCATAAGTTCCGCTGTGTGCCGCA 14265 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 10140 TGATTTGCCGTGGTGGCTGGTCTGCCGGGGGGCGATTCATAAGTTCCGCTGTGTGCCGCA 10081 Query 14266 TCTCACCGGGCGGCGCTTTGAGCACGGTGTGACGGACTGTTACACACTGTTCCGGGATGC 14325 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 10080 TCTCACCGGGCGGCGCTTTGAGCACGGGGTGACGGACTGTTACACGCTGTTCCGGGATGC 10021 Query 14326 TTATCATCTGGCGGGGATTGAGATGCCGGACTTTCATCGTGAGGATGACTGGTGGCGTAA 14385 |||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| | Sbjct 10020 TTATCATCTGGCGGGGATTGAGATGCCGGATTTTCATCGCGGGGATGACTGGTGGCGTCA 9961 Query 14386 CGGCCAGAATCTCTATCTGGATAATCTGGAGGCGACGGGGCTGTATCAGGTGCCGTTGTC 14445 ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 9960 CGGTCAGAATCTCTATCTGGATAATCTGGAGGCCACAGGGCTGTATCAGGTGCCGTTGTC 9901 Query 14446 AGCGGCACAGCCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCAGTGCCGAATCACGC 14505 | | ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 9900 ATCAGCACAACCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCGGTGCCGAATCATGC 9841 Query 14506 CGCAATTTACTGCGGCGACGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGCAAACG 14565 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 9840 CGCCATTTACTGCGGCGACGGTGAGCTGCTGCACCATATTCCTGAACAACTGAGTAAACG 9781 Query 14566 AGAGAGGTACACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATG 14625 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 9780 AGAGAGGTATACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGAATG 9721 Query 14626 GCGCGCATCTGCCTTTACGGGGATTTACAACGATTTGGTCGCCGCATCGACCTTCGTGTG 14685 || ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 9720 GCACGCATCTGCCTTTACGGGGATTTGCAACGATTTGGCCGCCGCATCGACCTTCGTGTG 9661 Query 14686 AAAACGGGGGCTGAAGCCATCCGGGCACTGGCCACACAGCTCCCGGCGTTTCGTCAGAAA 14745 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 9660 AAAACGGGGGCTGAAGCCATCCGCGCACTGGCCACACAGCTCCCGGCGTTTCGTCAGAAA 9601 Query 14746 CTGAGCGACGGCTGGTATCAGGTACGGATTGCCGGGCGGGACGTCAGCACGT----CCGG 14801 ||||| ||||||||||||||||| || ||||||||||| || | || || ||| Sbjct 9600 CTGAGTGACGGCTGGTATCAGGTGCGCATTGCCGGGCGTGATG----CAGGTGAAACCGA 9545 Query 14802 GTTAACGGCGCAGTTACATGAGACTCTGCCTGATGGCGCTGTAATTCATATTGTTCCCAG 14861 || | || | | ||||| | ||| | |||| || || || || || || || | Sbjct 9544 ATTGTCTGCCCGTCTTAATGAGCCGCTGGCAAATGGTGCAGTGATCCACATAGTACCGCG 9485 Query 14862 AGTCGCCGGGGCCAAGTCAGGTGGCGTATTCCAGATTGTCCTGGGGGCTGCCGCCATTGC 14921 | | || || || || || || || ||| || |||||||| || | || || Sbjct 9484 TCTGGTGGGAGCTAAAAGTGGCGGTGTGTTTCAGGCGGTGCTGGGGGCGGCTGTTATGGC 9425 Query 14922 CGGATCATTCTTTACCGCCGGAGCCACCCTTGCAGCATGGGGGGCAGCCATTGGGGCCGG 14981 | | || || ||| ||| | |||| || ||| ||| | Sbjct 9424 GGT----TGCTATAT----GGA--------TGCCG-----GGGGTAGGAATTATGGCGAG 9386 Query 14982 TGGTATGACCGGCATCCTGTTTTCTCTCGGTGCCAGTATGGTGCTCGGTGGTGTGGCGCA 15041 | | || |||||||||||||||||||||||| ||| || ||||| || || Sbjct 9385 TAATCTG---------CTGTTTTCTCTCGGTGCCAGTATGACGCTTGGCGGTGTTGCACA 9335 Query 15042 GATGCTGGCACCGAAAGCCAGAACTCCCCGTATACAGACAACGGATAACGGTAAGCAGAA 15101 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 9334 GATGCTGGCACCGAAAGCCAGAACTCCCCGTACACAGACAACGGATAACGGTAAGCAGAA 9275 Query 15102 CACCTATTTCTCCTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCTGTTCTGTA 15161 ||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 9274 CACGTATTTCTCGTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCCGTTCTGTA 9215 Query 15162 CGGGGAAATGCGCGTGGGGTCACGCGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGG 15221 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 9214 CGGTGAAATGCGCGTGGGGTCACGTGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGG 9155 Query 15222 GGACGGTGGTCAGGTTGTGGTGATTGGTCGCTGATGCAAAATGTTTTATGTGAAACCGCC 15281 ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 9154 GGATGGTGGTCAGGTTGTGGTGATTGGTCGCTGATGCAAAATGTTTCATGTGAAACCGCC 9095 Query 15282 TGCGGGCGGTTTTGTCATTTATGGAGCGTGAGGAATGGGTAAAGGAAGCAGTAAGGGGCA 15341 |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct 9094 TGCGGGCGGTTTTGTCGTTTATGGAGCGTGAGGAATGGGTAAAGGCAGCAGTAAGGGGCA 9035 Query 15342 TACCCCGCGCGAAGCGAAGGACAACCTGAAGTCCACGCAGTTGCTGAGTGTGATCGATGC 15401 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 9034 TACCCCGCGCGAAGCGAAGGACAACCTGAAATCCACGCAGTTGCTGAGTGTGATTGATGC 8975 Query 15402 CATCAGCGAAGGGCCGATTGAAGGTCCGGTGGATGGCTTAAAAAGCGTGCTGCTGAACAG 15461 |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | Sbjct 8974 CATCAGCGAAGGGCCGGTTGAAGGTCCGGTGGATGGATTAAAAAGCGTGCTGCTGAACGG 8915 Query 15462 TACGCCGGTGCTGGACACTGAGGGGAATACCAACATATCCGGTGTCACGGTGGTGTTCCG 15521 ||||||||| ||||||| |||||||| || ||| | |||||||| |||||||||||||| Sbjct 8914 TACGCCGGTCCTGGACAGCGAGGGGAAGACAAACTTTTCCGGTGTTACGGTGGTGTTCCG 8855 Query 15522 GGCTGGTGAGCAGGAGCAGACTCCGCCGGAGGGATTTGAATCCTCCGGCTCCGAGACGGT 15581 || || |||||||||||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct 8854 CGCCGGCGAGCAGGAGCAGACACCGCCGGAGGGGTTTGAATCTTCCGGCTCAGAGACTGT 8795 Query 15582 GCTGGGTACGGAAGTGAAATATGACACGCCGATCACCCGCACCATTACGTCTGCAAACAT 15641 ||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||| Sbjct 8794 GCTGGGTACGGAAGTGAAATACGACACGCCGATCACCCGGACCATCACGTCGGCAAACAT 8735 Query 15642 CGACCGTCTGCGCTTTACCTTCGGTGTACAGGCACTGGTGGAAACCACCTCAAAGGGTGA 15701 || ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| || Sbjct 8734 TGATCGTCTGCGCCTGACCTTCGGTGTGCAGGCACTGGTGGAAACCACCTCAAAGGGGGA 8675 Query 15702 CAGGAATCCGTCGGAAGTCCGCCTGCTGGTTCAGATACAACGTAACGGTGGCTGGGTGAC 15761 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 8674 CCGGAATCCGTCGGAAGTCCGCCTGCTGGTTCAGATACAGCGTAACGGTGGCTGGGTGAC 8615 Query 15762 GGAAAAAGACATCACCATTAAGGGCAAAACCACCTCGCAGTATCTGGCCTCGGTGGTGAT 15821 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 8614 GGAAAAAGACATCACCATTAAGGGCAAAACCACTTCGCAGTATCTGGCCTCGGTGGTGGT 8555 Query 15822 GGGTAACCTGCCGCCGCGCCCGTTTAATATCCGGATGCGCAGGATGACGCCGGACAGCAC 15881 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 8554 GGGTAACCTGCCGCCGCGCCCGTTTAATATCCGGATGCGCAGGATGACACCGGACAGCAC 8495 Query 15882 CACAGACCAGCTGCAGAACAAAACGCTCTGGTCGTCATACACTGAAATCATCGATGTGAA 15941 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 8494 CACAGACCAGCTGCAGAACAAAACGCTCTGGTCGTCGTACACCGAAATCATCGATGTGAA 8435 Query 15942 ACAGTGCTACCCGAACACGGCACTGGTCGGCGTGCAGGTGGACTCGGAGCAGTTCGGCAG 16001 ||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| | Sbjct 8434 ACAGTGCTACCCGAACACGGCGCTGGTCGGCGTGCAGGTGGATTCAGAGCAGTTCGGTAA 8375 Query 16002 CCAGCAGGTGAGCCGTAATTATCATCTGCGCGGGCGTATTCTGCAGGTGCCGTCGAACTA 16061 |||||||||||| || ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 8374 CCAGCAGGTGAGTCGCAATTATCATCTTCGCGGGCGCATTCTGCAGGTGCCGTCGAACTA 8315 Query 16062 TAACCCGCAGACGCGGCAATACAGCGGTATCTGGGACGGAACGTTTAAACCGGCATACAG 16121 ||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||| Sbjct 8314 TAACCCGCAGACGCGGCAATACAGCGGTATCTGGGACGGAACGCTTAAGCCAGCATACAG 8255 Query 16122 CAACAACATGGCCTGGTGTCTGTGGGATATGCTGACCCATCCGCGCTACGGCATGGGGAA 16181 ||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| Sbjct 8254 CAACAACATGGCCTGGTGTCTGTGGGACATGCTCACTCATCCGCGCTACGGCATGGGGAA 8195 Query 16182 ACGTCTTGGTGCGGCGGATGTGGATAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGA 16241 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 8194 ACGTCTTGGTGCGGCAGATGTGGACAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGA 8135 Query 16242 CCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCGTACCT 16301 |||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| Sbjct 8134 CCAGTCAGTGCCGGACGGATTTGGCGGCACGGAGCCGCGCATCACCTGTAACGCTTACCT 8075 Query 16302 GACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCGCTGTAT 16361 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 8074 GACCACACAGCGTAAGGCGTGGGATGTTCTCAGTGATTTCTGCTCGGCGATGCGCTGTAT 8015 Query 16362 GCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAGACGTG 16421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 8014 GCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAGGTGTG 7955 Query 16422 GACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTACAGCTT 16481 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 7954 GACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGTTACAGCTT 7895 Query 16482 CAGCGCCCTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGACCCGAACAACGG 16541 |||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct 7894 CAGCGCCCTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGATCCGGACAACGG 7835 Query 16542 CTGGGAGACGGCGACAGAGCTTGTTGAAGATACGCAGGCCATTGCCCGTTACGGTCGTAA 16601 |||||||||||||||||||| || || |||||||||||| ||||||||||||||| Sbjct 7834 TCATGAGACGGCGACAGAGCTTGTGGAGGACACGCAGGCCATTCTCCGTTACGGTCGTAA 7775 Query 16602 TGTTACGAAGATGGATGCCTTTGGCTGTACCAGCCGGGGGCAGGCACACCGCGCCGGGCT 16661 || ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct 7774 CGTCACGAAGATGGATGCCTTTGGCTGTACCAGCCGGGGACAGGCGCACCGCGCCGGGCT 7715 Query 16662 GTGGCTGATTAAAACAGAACTGCTGGAAACGCAGACCGTGGATTTCAGCGTCGGCGCAGA 16721 |||||||||||||||||||||||||||||||||||||||||| |||||||| || || || Sbjct 7714 GTGGCTGATTAAAACAGAACTGCTGGAAACGCAGACCGTGGACTTCAGCGTGGGTGCTGA 7655 Query 16722 AGGGCTTCGCCATGTACCGGGCGATGTTATTGAAATCTGCGATGATGACTATGCCGGTAT 16781 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 7654 AGGGCTTCGCCATGTACCGGGCGATGTCATTGAAATCTGCGATGATGACTATGCCGGTAT 7595 Query 16782 CAGCACCGGTGGTCGTGTGCTGGCGGTGAACAGCCAGACCCGGACGCTGACGCTCGACCG 16841 ||||||||| || || |||||||||||||||||||||||||||||||||||||||||||| Sbjct 7594 CAGCACCGGCGGGCGCGTGCTGGCGGTGAACAGCCAGACCCGGACGCTGACGCTCGACCG 7535 Query 16842 TGAAATCACGCTGCCATCCTCCGGTACCGCGCTGATAAGCCTGGTTGACGGAAGTGGCAA 16901 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 7534 TGAAATCACGCTGCCATCCTCCGGTACCACGCTGATAAGCCTGGTTGACGGAAGTGGCAA 7475 Query 16902 TCCGGTCAGCGTGGAGGTTCAGTCCGTCACCGACGGCGTGAAGGTAAAAGTGAGCCGTGT 16961 |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| | Sbjct 7474 TCCGGTCAGCGTGGAGGTCCAGTCCGTCACCGACGGCGTGAAGGTGAAAGTGAGCCGTAT 7415 Query 16962 TCCTGACGGTGTTGCTGAATACAGCGTATGGGAGCTGAAGCTGCCGACGCTGCGCCAGCG 17021 ||||||||| ||||| | ||||||||| |||| |||||||||||||||||||| |||||| Sbjct 7414 TCCTGACGGCGTTGCCGGATACAGCGTGTGGGGGCTGAAGCTGCCGACGCTGCACCAGCG 7355 Query 17022 ACTGTTCCGCTGCGTGAGTATCCGTGAGAACGACGACGGCACGTATGCCATCACCGCCGT 17081 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7354 CCTGTTCCGCTGTGTGAGTATCCGTGAGAACGACGACGGCACGTATGCCATCACCGCCGT 7295 Query 17082 GCAGCATGTGCCGGAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACA 17141 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| | || | Sbjct 7294 GCAGCATGTGCCGGAAAAAGAGGCCATTGTGGATAACGGGGCACACTTTGACAGTGACCG 7235 Query 17142 GAGTGGCACGGTGAATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCAC 17201 | | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 7234 GCGCGGCACGGTGAATGGTGTCACGCCGCCAGCAGTGCAGCACCTGACCGCAGAAGTCAT 7175 Query 17202 TGCAGACAGCGGGGAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGG 17261 |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct 7174 CGCAGGCAGCGGGGAATATCAGGTGCTGGCGCGCTGGGACACGCCGAAGGTGGTGAAGGG 7115 Query 17262 CGTGAGTTTCCTGCTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAG 17321 ||||| |||||||| || |||||||| ||||||| ||||||||||||||||||||||| Sbjct 7114 GGTGAGCTTCCTGCTTCGCCTGACCGTGGCAGCGGATGACGGCAGTGAGCGGCTGGTCAG 7055 Query 17322 CACGGCCCGGACGACGGAAACCACATACCGCTTCACGCAACTGGCGCTGGGGAACTACAG 17381 ||| ||||||||||||||||||||||| || |||||||| || ||| ||||| || | Sbjct 7054 CACAGCCCGGACGACGGAAACCACATATCGTTTCACGCAGCTTGCGTTGGGGCGTTATAC 6995 Query 17382 GCTGACAGTCCGGGCGGTAAATGCGTGGGGGCAGCAGGGCGATCCGGCGTCGGTATCGTT 17441 |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 6994 GCTGACAGTCCGGGCGGTAAATGCCCGGGGGCAGCAGGGCGATCCGGTGTCGGTATCGTT 6935 Query 17442 CCGGATTGCCGCACCGGCAGCACC-GTCGAGGATTGAGCTGACGCCGGGCTATTTTCAGA 17500 ||||||||| ||||||||||| || ||| | ||||| |||| ||||| |||||||||| Sbjct 6934 CCGGATTGCGGCACCGGCAGCGCCTGTC-ACTATTGAACTGATACCGGGGTATTTTCAGA 6876 Query 17501 TAACCGCCACGCCGCATCTTGCCGTTTATGACCCGACGGTACAGTTTGAGTTCTGGTTCT 17560 |||| || ||| | || || || |||||||||||||| ||||||||||||||||| | Sbjct 6875 TAACGGCGGTCCCGAAACTGGCTGTATATGACCCGACGGTGCAGTTTGAGTTCTGGTTTT 6816 Query 17561 CGGAAAAGCAGATTGCGGATATCAGACAGGTTGAAACCAGCACGCGTTATCTTGGTACGG 17620 ||||||||| ||||||||||||||| ||||||||||||| | || |||||||| |||| Sbjct 6815 CGGAAAAGCGGATTGCGGATATCAGGCAGGTTGAAACCACAGCCCGCTATCTTGGCACGG 6756 Query 17621 CGCTGTACTGGATAGCCGCCAGTATCAATATCAAACCGGGCCATGATTATTACTTTTATA 17680 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 6755 CGCTGTACTGGATAGCCGCCAGTATCAATATCAAACCGGGCCATGATTATTATTTTTACG 6696 Query 17681 TCCGCAGTGTGAACACCGTTGGCAAATCGGCATTCGTGGAGGCCGTCGGTCGGGCGAGCG 17740 | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 6695 TTCGCAGTGTGAACACCGTTGGCAAATCGGCATTTGTGGAGGCCGTCGGTCGGGCGAGCG 6636 Query 17741 ATGATGCGGAAGGTTACCTGGATTTTTTCAAAGGCAAGATAACCGAATCCCATCTCGGCA 17800 |||||||||||||||| ||| ||||| ||||| ||| | || | |||||||||| Sbjct 6635 ATGATGCGGAAGGTTATCTGAGTTTTTATAAAGGGTTGATCAATAAAACGCATCTCGGCA 6576 Query 17801 AGGAGCTGCTGGA 17813 ||||| || |||| Sbjct 6575 AGGAGTTG-TGGA 6564 Score = 260 bits (288), Expect = 4e-65 Identities = 236/296 (80%), Gaps = 2/296 (1%) Strand=Plus/Minus Query 19269 TGGCGTGGAGTGCAGGTATACAGATTAATCCGGCAGCGTCCGTCGTTGTTGATATTGCTT 19328 |||||||| | || || | ||| |||| ||| | | ||||| | |||| |||||| Sbjct 5041 TGGCGTGGGGGGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGACCTTGCTT 4982 Query 19329 ATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATA 19388 ||||||| |||||||||||||||||||| |||||||| |||||||| || |||||||||| Sbjct 4981 ATGAAGGTTCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATA 4922 Query 19389 AATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCttttt 19448 | ||||||||||||||||||||||||||||||||||||||| || | || |||| ||| Sbjct 4921 AGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCTGGTTCAGGCGGGC--TTT 4864 Query 19449 ttGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACC 19508 ||||||||||||||||||||||||||||||||| || |||||||| || | || ||||| Sbjct 4863 TTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGATGGGGCGGGTAAACC 4804 Query 19509 GGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGG 19564 || || || | ||| | ||| |||||| | | ||| | || || |||| Sbjct 4803 TGTCGTAAATTGTGCGATTGAACTGCGGGCCAGAAGAACCAGTCCGACCGTTGTGG 4748 Score = 255 bits (282), Expect = 2e-63 Identities = 275/364 (76%), Gaps = 0/364 (0%) Strand=Plus/Minus Query 17898 CATGTGGGCTGTCAAAATTGAGCAGACCAAAGACGGCAAACATTATGTCGCGGGTATTGG 17957 |||||||||||| || | | |||| || ||||| | |||| | |||||||| || Sbjct 6394 CATGTGGGCTGTGAAGCTGCAACAGATGAAGGACGGACGCCTTTATATTGCGGGTATCGG 6335 Query 17958 CCTCAGCATGGAGGACACGGAGGAAGGCAAACTGAGCCAGTTTCTGGTTGCCGCCAATCG 18017 | | || ||| | ||| | ||| | | ||| ||| | ||| | || || | | Sbjct 6334 TGCCGGTATTGAGAATACGCCAGCAGGAATGCAGAGTCAGGTGCTGCTGGCGGCAGACAG 6275 Query 18018 TATCGCATTTATTGACCCGGCAAACGGGAATGAAACGCCGATGTTTGTGGCGCAGGGCAA 18077 || || | ||| | || || || || || || |||||||||||| | |||||| | Sbjct 6274 GATTGCGATGATTAATCCTGCGAATGGCAACACAAAGCCGATGTTTGTTGGTCAGGGCGA 6215 Query 18078 CCAGATATTCATGAACGACGTGTTCCTGAAGCGCCTGACGGCCCCCACCATTACCAGCGG 18137 ||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| Sbjct 6214 TCAGATATTCATGAACGACGTGTTCCTGAAACGCCTGACGGCTCCGACCATTACCAGCGG 6155 Query 18138 CGGCAATCCTCCGGCCTTTTCCCTGACACCGGACGGAAAGCTGACCGCTAAAAATGCGGA 18197 ||| ||||||||||| |||||||||||||| | |||| |||||| || |||||||| || Sbjct 6154 CGGTAATCCTCCGGCATTTTCCCTGACACCTGGCGGACGGCTGACGGCGAAAAATGCCGA 6095 Query 18198 TATCAGTGGCAGTGTGAATGCGAACTCCGGGACGCTCAGTAATGTGACGATAGCTGAAAA 18257 |||||| || | ||||| ||||||||||||||||||| || || ||||| | | || Sbjct 6094 TATCAGCGGTAACGTGAACGCGAACTCCGGGACGCTCAACAACGTCACGATTAATAAGAA 6035 Query 18258 CTGT 18261 |||| Sbjct 6034 CTGT 6031 >seq1137 Length=12692 Score = 96.9 bits (106), Expect = 1e-15 Identities = 153/213 (72%), Gaps = 11/213 (5%) Strand=Plus/Minus Query 45721 ATATTATCTGTGGCTAGATAGTAAATATAATGTG--AGACGTTGTGACGTTTTAGTTCAG 45778 || ||||| || || ||||| ||||| ||||||| | ||| |||| |||||| ||| | Sbjct 6208 ATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACG--GTGATGTTTTAATTCTG 6151 Query 45779 AATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGG 45838 |||||||| | ||| | ||||||| |||||| || || || | || ||||| Sbjct 6150 AATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAA 6091 Query 45839 CAACCTGAGCCATTGG--TAA-AACCTTCCATGTGA--TACGAGGGCGCGTAGTTTGCAT 45893 | |||||| |||| | ||| ||||| | ||| | | ||| ||||||| |||| Sbjct 6090 CGACCTGATCCATCAGGATAATAACCT--CTTGTTAGTTGTGAGACTGCGTAGTGTGCAC 6033 Query 45894 TATCGTTTTTATCGTTTCAATCTGGTCTGACCT 45926 |||| ||||| | |||||||||||||| ||| Sbjct 6032 GATCGGTTTTACCACTTCAATCTGGTCTGTCCT 6000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150558969171744