Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_019723.1
Length=47090
Score E
Sequences producing significant alignments: (Bits) Value
seq1103 6419 0.0
seq1137 96.9 1e-15
>seq1103
Length=13301
Score = 6419 bits (7118), Expect = 0.0
Identities = 4465/5053 (88%), Gaps = 57/5053 (1%)
Strand=Plus/Minus
Query 12775 GATTAACAACGACGGCACGAACGGGCAGATAGGTCCGGCTGCTCTGAAGGCGGTGTATGA 12834
||| || |||||||||||||||||||||||||||||||| || ||||||| ||| |||||
Sbjct 11573 GATCAATAACGACGGCACGAACGGGCAGATAGGTCCGGCAGCACTGAAGGTGGTTTATGA 11514
Query 12835 CATGGCCCGCAAGGGTGCCCGTGATGAAATTCAGACA-CAGATGCGTGATGGTGGCCTGT 12893
| | | || | ||| || || || ||| ||| ||||||||||||| ||
Sbjct 11513 CCTCGGGAAAAAAGCGGCCGCGGACTTTATGCA-ACAGCAGGCCCGTGATGGTGGCCGGT 11455
Query 12894 TCTCCGGAGGTGGACG---ATGAAGACCTTCCGCTGGAAAGTGAAACCCGGTATGGATGT 12950
| |||| || ||| |||| || |||||||| ||| || | |||| ||||
Sbjct 11454 TAAGTGGAGCATACCGGTAATGGAGACGTTTCGCTGGAAGGTGCGCCCGGATATGAATGT 11395
Query 12951 GGCTTCGGTCCCTTCTGTAAGAAAGGTGCGCTTTGGTGATGGCTATTCTCAGCGAGCGCC 13010
|| || | || || ||| | |||||||| ||| ||||| ||||
Sbjct 11394 GGTATCAGAGCCAAAAGTGGTGGCAGTGAAGCTGGGTGATGGTTATGAACAGCGT-CGCC 11336
Query 13011 TGCCGGG-CTGAATGCCAACCTGAAAACGTACAGCGTGACGCTTTCTGTCCCCC---GTG 13066
| |||| |||||| ||| || |||||||||||| | ||| | |||
Sbjct 11335 CGGCGGGACTGAATAATCTGCTGTCGACTTACAGCGTGACGATACGTGTTCGTAAAGGTG 11276
Query 13067 AGGAGGCCACGGTACTGGAGTCGTTTCTGGAAGAGCACGGGGGCTGGAAATCCTTTCTGT 13126
| | |||| | | | | ||||||||| |||||| ||| | |||| ||
Sbjct 11275 AACAC-CCACCTT--TAAAAGCCTTTCTGGAACGGCACGGTGGCGTCCGCGCATTTCAGT 11219
Query 13127 GGACGCCGCCTTATGAGTGGCGGCAGATAAAGGTGACCTGCGCAAAATGGTCGTCGCGGG 13186
||||||| |||||||| ||| | ||| | |||| || ||||||||| | | |
Sbjct 11218 GGACGCCACCTTATGACTGGAAACCGATCAGGGTGGTTTGTCGTAAATGGTCGGCAAGCG 11159
Query 13187 TCAGTATGCTGCGTGTTGAGTTCAGCG-CAGAGTTTGAACAGGTGGTGAACTGATGCAGG 13245
| | | | | || || | | || | || |||||||||||||||||||||||||||
Sbjct 11158 TGGGGGCGTTATGGGT-GACTGTAACGGCCGATTTTGAACAGGTGGTGAACTGATGCAGG 11100
Query 13246 ATATCCGGCAGGAAACACTGAATGAATGCACCCGTGCGGAGCAGTCGGCCAGCGTGGTGC 13305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11099 ATATCCGGCAGGAAACACTGAATGAATGCACCCGTGCGGAGCAGTCGGCCAGCGTGGTGC 11040
Query 13306 TCTGGGAAATCGACCTGACAGAGGTCGGTGGAGAACGTTATTTTTTCTGTAATGAGCAGA 13365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 11039 TCTGGGAAATCGACCTGACAGAGGTCGGTGGAGAACGTTATTTTTTCTGTAATGAGCAGA 10980
Query 13366 ACGAAAAAGGTGAGCCGGTCACCTGGCAGGGGCGACAGTATCAGCCGTATCCCATTCAGG 13425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10979 ACGAAAAAGGTGAGCCGGTCACCTGGCAGGGGCGACAGTATCAGCCGTATCCCATTCAGG 10920
Query 13426 GGAGCGGTTTTGAACTGAATGGCAAAGGCACCAGTACGCGCCCCACGCTGACGGTTTCTA 13485
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10919 GGAGTGGTTTTGAACTGAATGGCAAAGGCACCAGTACGCGCCCCACGCTGACGGTTTCTA 10860
Query 13486 ACCTGTACGGTATGGTCACCGGGATGGCGGAAGATATGCAGAGTCTGGTCGGCGGAACGG 13545
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 10859 ACCTGTACGGTATGGTCACCGGGATGGCGGAAGATCTGCAGAGTCTGGTCGGCGGAACGG 10800
Query 13546 TGGTCCGGCGTAAGGTTTACGCCCGTTTTCTGGATGCGGTGAACTTCGTCAACGGAAACA 13605
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 10799 TGGTCCGGCGTAAGGTTTACGCCCGTTTTCTTGATGCGGTGAACTTCGTCAACGGAAACA 10740
Query 13606 GTTACGCCGATCCGGAGCAGGAGGTGATCAGCCGCTGGCGCATTGAGCAGTGCAGCGAAC 13665
| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 10739 GAGACGCCGATCCGGAGCAGGAGGTGATCAGCCGCTGGCGCATCGAGCAGTGCAGCGAAC 10680
Query 13666 TGAGCGCGGTGAGTGCCTCCTTTGTACTGTCCACGCCGACGGAAACGGATGGCGCTGTTT 13725
|||||||||| |||||||| ||||| ||| |||| || ||||| ||||||||||| ||||
Sbjct 10679 TGAGCGCGGTCAGTGCCTCTTTTGTGCTGGCCACACCAACGGAGACGGATGGCGCGGTTT 10620
Query 13726 TTCCGGGACGTATCATGCTGGCCAACACCTGCACCTGGACCTATCGCGGTGACGAGTGCG 13785
| ||||| |||||||||||||| || ||||| | |||||||| || ||| ||||| |
Sbjct 10619 TCCCGGGGCGTATCATGCTGGCGAATACCTGTATGTGGACCTACCGTTCTGATGAGTGTG 10560
Query 13786 GTTATAGCGGTCCGGCTGTCGCGGATGAATATGACCAGCCAACGTCCGATATCACGAAGG 13845
|||| | || ||| || || || || | ||| | |||||| | |||||| |||||
Sbjct 10559 GTTACACGGGCAGGGCAGTGGCTGACGAGTTCGACAAACCAACGACGGATATCCGGAAGG 10500
Query 13846 ATAAATGCAGCAAATGCCTGAGCGGTTGTAAGTTCCGCAATAACGTCGGCAACTTTGGCG 13905
| ||||||||||| || || |||| ||| |||| ||||| || ||| || || ||||
Sbjct 10499 ACAAATGCAGCAAGTGTATGCGCGGGTGTGAGTTGCGCAACAATACCGGTAATTTCGGCG 10440
Query 13906 GCTTCCTTTCCATTAACAAACTTTCGCAGTAAATCCCATGACACAGACAGAATCAGCGAT 13965
| ||||||||||| || |||||||| |||||||||| |||||||||||||||||||||||
Sbjct 10439 GTTTCCTTTCCATCAATAAACTTTCTCAGTAAATCC-ATGACACAGACAGAATCAGCGAT 10381
Query 13966 TCTGGCGCACGCCCGGCGATGTGCGCCAGCGGAGTCGTGCGGCTTCGTGGTAAGCACGCC 14025
||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||
Sbjct 10380 TCTGGCGCACGCCCGGCGATGTGCGCCAGCGGAGTCGTGTGGCTTCGTGGTGAGAACGCC 10321
Query 14026 GGAGGGGGAAAGATATTTCCCCTGCGTGAATATCTCCGGTGAGCCGGAGGCGTATTTCCG 14085
|||||| || || ||| | ||| ||| ||||||||||||||||||||||| |||||
Sbjct 10320 GGAGGGAGACAGGTATCTTCCCAGCGAGAATATCTCCGGTGAGCCGGAGGAACGGTTCCG 10261
Query 14086 TATGTCGCCGGAAGACTGGCTGCAGGCAGAAATGCAGGGTGAGATTGTGGCGCTGGTCCA 14145
||| | ||||| |||||||||| |||| |||||||||||||||||||||| ||||||||
Sbjct 10260 GATGGCTCCGGAGGACTGGCTGCGGGCACAAATGCAGGGTGAGATTGTGGCACTGGTCCA 10201
Query 14146 CAGCCACCCCGGTGGTCTGCCCTGGCTGAGTGAGGCCGACCGGCGGCTGCAGGTGCAGAG 14205
||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 10200 CAGTCATCCCGGTGGTCTGCCCTGGCTGAGTGAGGCTGACCGGCGGCTGCAGGTGCAGAG 10141
Query 14206 TGATTTGCCGTGGTGGCTGGTCTGCCGGGGGACGATTCATAAGTTCCGCTGTGTGCCGCA 14265
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 10140 TGATTTGCCGTGGTGGCTGGTCTGCCGGGGGGCGATTCATAAGTTCCGCTGTGTGCCGCA 10081
Query 14266 TCTCACCGGGCGGCGCTTTGAGCACGGTGTGACGGACTGTTACACACTGTTCCGGGATGC 14325
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 10080 TCTCACCGGGCGGCGCTTTGAGCACGGGGTGACGGACTGTTACACGCTGTTCCGGGATGC 10021
Query 14326 TTATCATCTGGCGGGGATTGAGATGCCGGACTTTCATCGTGAGGATGACTGGTGGCGTAA 14385
|||||||||||||||||||||||||||||| |||||||| | |||||||||||||||| |
Sbjct 10020 TTATCATCTGGCGGGGATTGAGATGCCGGATTTTCATCGCGGGGATGACTGGTGGCGTCA 9961
Query 14386 CGGCCAGAATCTCTATCTGGATAATCTGGAGGCGACGGGGCTGTATCAGGTGCCGTTGTC 14445
||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 9960 CGGTCAGAATCTCTATCTGGATAATCTGGAGGCCACAGGGCTGTATCAGGTGCCGTTGTC 9901
Query 14446 AGCGGCACAGCCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCAGTGCCGAATCACGC 14505
| | ||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct 9900 ATCAGCACAACCGGGCGATGTGCTGCTGTGCTGTTTTGGTTCATCGGTGCCGAATCATGC 9841
Query 14506 CGCAATTTACTGCGGCGACGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGCAAACG 14565
||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 9840 CGCCATTTACTGCGGCGACGGTGAGCTGCTGCACCATATTCCTGAACAACTGAGTAAACG 9781
Query 14566 AGAGAGGTACACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATG 14625
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 9780 AGAGAGGTATACCGACAAATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGAATG 9721
Query 14626 GCGCGCATCTGCCTTTACGGGGATTTACAACGATTTGGTCGCCGCATCGACCTTCGTGTG 14685
|| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 9720 GCACGCATCTGCCTTTACGGGGATTTGCAACGATTTGGCCGCCGCATCGACCTTCGTGTG 9661
Query 14686 AAAACGGGGGCTGAAGCCATCCGGGCACTGGCCACACAGCTCCCGGCGTTTCGTCAGAAA 14745
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 9660 AAAACGGGGGCTGAAGCCATCCGCGCACTGGCCACACAGCTCCCGGCGTTTCGTCAGAAA 9601
Query 14746 CTGAGCGACGGCTGGTATCAGGTACGGATTGCCGGGCGGGACGTCAGCACGT----CCGG 14801
||||| ||||||||||||||||| || ||||||||||| || | || || |||
Sbjct 9600 CTGAGTGACGGCTGGTATCAGGTGCGCATTGCCGGGCGTGATG----CAGGTGAAACCGA 9545
Query 14802 GTTAACGGCGCAGTTACATGAGACTCTGCCTGATGGCGCTGTAATTCATATTGTTCCCAG 14861
|| | || | | ||||| | ||| | |||| || || || || || || || |
Sbjct 9544 ATTGTCTGCCCGTCTTAATGAGCCGCTGGCAAATGGTGCAGTGATCCACATAGTACCGCG 9485
Query 14862 AGTCGCCGGGGCCAAGTCAGGTGGCGTATTCCAGATTGTCCTGGGGGCTGCCGCCATTGC 14921
| | || || || || || || || ||| || |||||||| || | || ||
Sbjct 9484 TCTGGTGGGAGCTAAAAGTGGCGGTGTGTTTCAGGCGGTGCTGGGGGCGGCTGTTATGGC 9425
Query 14922 CGGATCATTCTTTACCGCCGGAGCCACCCTTGCAGCATGGGGGGCAGCCATTGGGGCCGG 14981
| | || || ||| ||| | |||| || ||| ||| |
Sbjct 9424 GGT----TGCTATAT----GGA--------TGCCG-----GGGGTAGGAATTATGGCGAG 9386
Query 14982 TGGTATGACCGGCATCCTGTTTTCTCTCGGTGCCAGTATGGTGCTCGGTGGTGTGGCGCA 15041
| | || |||||||||||||||||||||||| ||| || ||||| || ||
Sbjct 9385 TAATCTG---------CTGTTTTCTCTCGGTGCCAGTATGACGCTTGGCGGTGTTGCACA 9335
Query 15042 GATGCTGGCACCGAAAGCCAGAACTCCCCGTATACAGACAACGGATAACGGTAAGCAGAA 15101
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 9334 GATGCTGGCACCGAAAGCCAGAACTCCCCGTACACAGACAACGGATAACGGTAAGCAGAA 9275
Query 15102 CACCTATTTCTCCTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCTGTTCTGTA 15161
||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 9274 CACGTATTTCTCGTCACTGGATAACATGGTTGCCCAGGGCAATGTTCTGCCCGTTCTGTA 9215
Query 15162 CGGGGAAATGCGCGTGGGGTCACGCGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGG 15221
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 9214 CGGTGAAATGCGCGTGGGGTCACGTGTGGTTTCTCAGGAGATCAGCACGGCAGACGAAGG 9155
Query 15222 GGACGGTGGTCAGGTTGTGGTGATTGGTCGCTGATGCAAAATGTTTTATGTGAAACCGCC 15281
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 9154 GGATGGTGGTCAGGTTGTGGTGATTGGTCGCTGATGCAAAATGTTTCATGTGAAACCGCC 9095
Query 15282 TGCGGGCGGTTTTGTCATTTATGGAGCGTGAGGAATGGGTAAAGGAAGCAGTAAGGGGCA 15341
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 9094 TGCGGGCGGTTTTGTCGTTTATGGAGCGTGAGGAATGGGTAAAGGCAGCAGTAAGGGGCA 9035
Query 15342 TACCCCGCGCGAAGCGAAGGACAACCTGAAGTCCACGCAGTTGCTGAGTGTGATCGATGC 15401
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 9034 TACCCCGCGCGAAGCGAAGGACAACCTGAAATCCACGCAGTTGCTGAGTGTGATTGATGC 8975
Query 15402 CATCAGCGAAGGGCCGATTGAAGGTCCGGTGGATGGCTTAAAAAGCGTGCTGCTGAACAG 15461
|||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 8974 CATCAGCGAAGGGCCGGTTGAAGGTCCGGTGGATGGATTAAAAAGCGTGCTGCTGAACGG 8915
Query 15462 TACGCCGGTGCTGGACACTGAGGGGAATACCAACATATCCGGTGTCACGGTGGTGTTCCG 15521
||||||||| ||||||| |||||||| || ||| | |||||||| ||||||||||||||
Sbjct 8914 TACGCCGGTCCTGGACAGCGAGGGGAAGACAAACTTTTCCGGTGTTACGGTGGTGTTCCG 8855
Query 15522 GGCTGGTGAGCAGGAGCAGACTCCGCCGGAGGGATTTGAATCCTCCGGCTCCGAGACGGT 15581
|| || |||||||||||||| ||||||||||| |||||||| |||||||| ||||| ||
Sbjct 8854 CGCCGGCGAGCAGGAGCAGACACCGCCGGAGGGGTTTGAATCTTCCGGCTCAGAGACTGT 8795
Query 15582 GCTGGGTACGGAAGTGAAATATGACACGCCGATCACCCGCACCATTACGTCTGCAAACAT 15641
||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||
Sbjct 8794 GCTGGGTACGGAAGTGAAATACGACACGCCGATCACCCGGACCATCACGTCGGCAAACAT 8735
Query 15642 CGACCGTCTGCGCTTTACCTTCGGTGTACAGGCACTGGTGGAAACCACCTCAAAGGGTGA 15701
|| ||||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct 8734 TGATCGTCTGCGCCTGACCTTCGGTGTGCAGGCACTGGTGGAAACCACCTCAAAGGGGGA 8675
Query 15702 CAGGAATCCGTCGGAAGTCCGCCTGCTGGTTCAGATACAACGTAACGGTGGCTGGGTGAC 15761
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 8674 CCGGAATCCGTCGGAAGTCCGCCTGCTGGTTCAGATACAGCGTAACGGTGGCTGGGTGAC 8615
Query 15762 GGAAAAAGACATCACCATTAAGGGCAAAACCACCTCGCAGTATCTGGCCTCGGTGGTGAT 15821
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 8614 GGAAAAAGACATCACCATTAAGGGCAAAACCACTTCGCAGTATCTGGCCTCGGTGGTGGT 8555
Query 15822 GGGTAACCTGCCGCCGCGCCCGTTTAATATCCGGATGCGCAGGATGACGCCGGACAGCAC 15881
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 8554 GGGTAACCTGCCGCCGCGCCCGTTTAATATCCGGATGCGCAGGATGACACCGGACAGCAC 8495
Query 15882 CACAGACCAGCTGCAGAACAAAACGCTCTGGTCGTCATACACTGAAATCATCGATGTGAA 15941
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 8494 CACAGACCAGCTGCAGAACAAAACGCTCTGGTCGTCGTACACCGAAATCATCGATGTGAA 8435
Query 15942 ACAGTGCTACCCGAACACGGCACTGGTCGGCGTGCAGGTGGACTCGGAGCAGTTCGGCAG 16001
||||||||||||||||||||| |||||||||||||||||||| || ||||||||||| |
Sbjct 8434 ACAGTGCTACCCGAACACGGCGCTGGTCGGCGTGCAGGTGGATTCAGAGCAGTTCGGTAA 8375
Query 16002 CCAGCAGGTGAGCCGTAATTATCATCTGCGCGGGCGTATTCTGCAGGTGCCGTCGAACTA 16061
|||||||||||| || ||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 8374 CCAGCAGGTGAGTCGCAATTATCATCTTCGCGGGCGCATTCTGCAGGTGCCGTCGAACTA 8315
Query 16062 TAACCCGCAGACGCGGCAATACAGCGGTATCTGGGACGGAACGTTTAAACCGGCATACAG 16121
||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||
Sbjct 8314 TAACCCGCAGACGCGGCAATACAGCGGTATCTGGGACGGAACGCTTAAGCCAGCATACAG 8255
Query 16122 CAACAACATGGCCTGGTGTCTGTGGGATATGCTGACCCATCCGCGCTACGGCATGGGGAA 16181
||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct 8254 CAACAACATGGCCTGGTGTCTGTGGGACATGCTCACTCATCCGCGCTACGGCATGGGGAA 8195
Query 16182 ACGTCTTGGTGCGGCGGATGTGGATAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGA 16241
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 8194 ACGTCTTGGTGCGGCAGATGTGGACAAATGGGCGCTGTATGTCATCGGCCAGTACTGCGA 8135
Query 16242 CCAGTCAGTGCCGGACGGCTTTGGCGGCACGGAGCCGCGCATCACCTGTAATGCGTACCT 16301
|||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||
Sbjct 8134 CCAGTCAGTGCCGGACGGATTTGGCGGCACGGAGCCGCGCATCACCTGTAACGCTTACCT 8075
Query 16302 GACCACACAGCGTAAGGCGTGGGATGTGCTCAGCGATTTCTGCTCGGCGATGCGCTGTAT 16361
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 8074 GACCACACAGCGTAAGGCGTGGGATGTTCTCAGTGATTTCTGCTCGGCGATGCGCTGTAT 8015
Query 16362 GCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAGACGTG 16421
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 8014 GCCGGTATGGAACGGGCAGACGCTGACGTTCGTGCAGGACCGACCGTCGGATAAGGTGTG 7955
Query 16422 GACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGCTACAGCTT 16481
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 7954 GACCTATAACCGCAGTAATGTGGTGATGCCGGATGATGGCGCGCCGTTCCGTTACAGCTT 7895
Query 16482 CAGCGCCCTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGACCCGAACAACGG 16541
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 7894 CAGCGCCCTGAAGGACCGCCATAATGCCGTTGAGGTGAACTGGATTGATCCGGACAACGG 7835
Query 16542 CTGGGAGACGGCGACAGAGCTTGTTGAAGATACGCAGGCCATTGCCCGTTACGGTCGTAA 16601
|||||||||||||||||||| || || |||||||||||| |||||||||||||||
Sbjct 7834 TCATGAGACGGCGACAGAGCTTGTGGAGGACACGCAGGCCATTCTCCGTTACGGTCGTAA 7775
Query 16602 TGTTACGAAGATGGATGCCTTTGGCTGTACCAGCCGGGGGCAGGCACACCGCGCCGGGCT 16661
|| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 7774 CGTCACGAAGATGGATGCCTTTGGCTGTACCAGCCGGGGACAGGCGCACCGCGCCGGGCT 7715
Query 16662 GTGGCTGATTAAAACAGAACTGCTGGAAACGCAGACCGTGGATTTCAGCGTCGGCGCAGA 16721
|||||||||||||||||||||||||||||||||||||||||| |||||||| || || ||
Sbjct 7714 GTGGCTGATTAAAACAGAACTGCTGGAAACGCAGACCGTGGACTTCAGCGTGGGTGCTGA 7655
Query 16722 AGGGCTTCGCCATGTACCGGGCGATGTTATTGAAATCTGCGATGATGACTATGCCGGTAT 16781
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 7654 AGGGCTTCGCCATGTACCGGGCGATGTCATTGAAATCTGCGATGATGACTATGCCGGTAT 7595
Query 16782 CAGCACCGGTGGTCGTGTGCTGGCGGTGAACAGCCAGACCCGGACGCTGACGCTCGACCG 16841
||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7594 CAGCACCGGCGGGCGCGTGCTGGCGGTGAACAGCCAGACCCGGACGCTGACGCTCGACCG 7535
Query 16842 TGAAATCACGCTGCCATCCTCCGGTACCGCGCTGATAAGCCTGGTTGACGGAAGTGGCAA 16901
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 7534 TGAAATCACGCTGCCATCCTCCGGTACCACGCTGATAAGCCTGGTTGACGGAAGTGGCAA 7475
Query 16902 TCCGGTCAGCGTGGAGGTTCAGTCCGTCACCGACGGCGTGAAGGTAAAAGTGAGCCGTGT 16961
|||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
Sbjct 7474 TCCGGTCAGCGTGGAGGTCCAGTCCGTCACCGACGGCGTGAAGGTGAAAGTGAGCCGTAT 7415
Query 16962 TCCTGACGGTGTTGCTGAATACAGCGTATGGGAGCTGAAGCTGCCGACGCTGCGCCAGCG 17021
||||||||| ||||| | ||||||||| |||| |||||||||||||||||||| ||||||
Sbjct 7414 TCCTGACGGCGTTGCCGGATACAGCGTGTGGGGGCTGAAGCTGCCGACGCTGCACCAGCG 7355
Query 17022 ACTGTTCCGCTGCGTGAGTATCCGTGAGAACGACGACGGCACGTATGCCATCACCGCCGT 17081
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7354 CCTGTTCCGCTGTGTGAGTATCCGTGAGAACGACGACGGCACGTATGCCATCACCGCCGT 7295
Query 17082 GCAGCATGTGCCGGAAAAAGAGGCCATCGTGGATAACGGGGCGCACTTTGACGGCGAACA 17141
||||||||||||||||||||||||||| |||||||||||||| ||||||||| | || |
Sbjct 7294 GCAGCATGTGCCGGAAAAAGAGGCCATTGTGGATAACGGGGCACACTTTGACAGTGACCG 7235
Query 17142 GAGTGGCACGGTGAATGGTGTCACGCCGCCAGCGGTGCAGCACCTGACCGCAGAAGTCAC 17201
| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 7234 GCGCGGCACGGTGAATGGTGTCACGCCGCCAGCAGTGCAGCACCTGACCGCAGAAGTCAT 7175
Query 17202 TGCAGACAGCGGGGAATATCAGGTGCTGGCGCGATGGGACACACCGAAGGTGGTGAAGGG 17261
|||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 7174 CGCAGGCAGCGGGGAATATCAGGTGCTGGCGCGCTGGGACACGCCGAAGGTGGTGAAGGG 7115
Query 17262 CGTGAGTTTCCTGCTCCGTCTGACCGTAACAGCGGACGACGGCAGTGAGCGGCTGGTCAG 17321
||||| |||||||| || |||||||| ||||||| |||||||||||||||||||||||
Sbjct 7114 GGTGAGCTTCCTGCTTCGCCTGACCGTGGCAGCGGATGACGGCAGTGAGCGGCTGGTCAG 7055
Query 17322 CACGGCCCGGACGACGGAAACCACATACCGCTTCACGCAACTGGCGCTGGGGAACTACAG 17381
||| ||||||||||||||||||||||| || |||||||| || ||| ||||| || |
Sbjct 7054 CACAGCCCGGACGACGGAAACCACATATCGTTTCACGCAGCTTGCGTTGGGGCGTTATAC 6995
Query 17382 GCTGACAGTCCGGGCGGTAAATGCGTGGGGGCAGCAGGGCGATCCGGCGTCGGTATCGTT 17441
|||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 6994 GCTGACAGTCCGGGCGGTAAATGCCCGGGGGCAGCAGGGCGATCCGGTGTCGGTATCGTT 6935
Query 17442 CCGGATTGCCGCACCGGCAGCACC-GTCGAGGATTGAGCTGACGCCGGGCTATTTTCAGA 17500
||||||||| ||||||||||| || ||| | ||||| |||| ||||| ||||||||||
Sbjct 6934 CCGGATTGCGGCACCGGCAGCGCCTGTC-ACTATTGAACTGATACCGGGGTATTTTCAGA 6876
Query 17501 TAACCGCCACGCCGCATCTTGCCGTTTATGACCCGACGGTACAGTTTGAGTTCTGGTTCT 17560
|||| || ||| | || || || |||||||||||||| ||||||||||||||||| |
Sbjct 6875 TAACGGCGGTCCCGAAACTGGCTGTATATGACCCGACGGTGCAGTTTGAGTTCTGGTTTT 6816
Query 17561 CGGAAAAGCAGATTGCGGATATCAGACAGGTTGAAACCAGCACGCGTTATCTTGGTACGG 17620
||||||||| ||||||||||||||| ||||||||||||| | || |||||||| ||||
Sbjct 6815 CGGAAAAGCGGATTGCGGATATCAGGCAGGTTGAAACCACAGCCCGCTATCTTGGCACGG 6756
Query 17621 CGCTGTACTGGATAGCCGCCAGTATCAATATCAAACCGGGCCATGATTATTACTTTTATA 17680
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 6755 CGCTGTACTGGATAGCCGCCAGTATCAATATCAAACCGGGCCATGATTATTATTTTTACG 6696
Query 17681 TCCGCAGTGTGAACACCGTTGGCAAATCGGCATTCGTGGAGGCCGTCGGTCGGGCGAGCG 17740
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 6695 TTCGCAGTGTGAACACCGTTGGCAAATCGGCATTTGTGGAGGCCGTCGGTCGGGCGAGCG 6636
Query 17741 ATGATGCGGAAGGTTACCTGGATTTTTTCAAAGGCAAGATAACCGAATCCCATCTCGGCA 17800
|||||||||||||||| ||| ||||| ||||| ||| | || | ||||||||||
Sbjct 6635 ATGATGCGGAAGGTTATCTGAGTTTTTATAAAGGGTTGATCAATAAAACGCATCTCGGCA 6576
Query 17801 AGGAGCTGCTGGA 17813
||||| || ||||
Sbjct 6575 AGGAGTTG-TGGA 6564
Score = 260 bits (288), Expect = 4e-65
Identities = 236/296 (80%), Gaps = 2/296 (1%)
Strand=Plus/Minus
Query 19269 TGGCGTGGAGTGCAGGTATACAGATTAATCCGGCAGCGTCCGTCGTTGTTGATATTGCTT 19328
|||||||| | || || | ||| |||| ||| | | ||||| | |||| ||||||
Sbjct 5041 TGGCGTGGGGGGCTGGCGTGCAGTTTAACCCGACCGAATCCGTGGCCATTGACCTTGCTT 4982
Query 19329 ATGAAGGCTCCGGCAGTGGCGACTGGCGTACTGACGGATTCATCGTTGGGGTCGGTTATA 19388
||||||| |||||||||||||||||||| |||||||| |||||||| || ||||||||||
Sbjct 4981 ATGAAGGTTCCGGCAGTGGCGACTGGCGCACTGACGGTTTCATCGTGGGTGTCGGTTATA 4922
Query 19389 AATTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGAACCGGTGGGCttttt 19448
| ||||||||||||||||||||||||||||||||||||||| || | || |||| |||
Sbjct 4921 AGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCTGGTTCAGGCGGGC--TTT 4864
Query 19449 ttGTGGGGTGAATATGGCAGTAAAGATTTCAGGAGTCCTGAAAGACGGCACAGGAAAACC 19508
||||||||||||||||||||||||||||||||| || |||||||| || | || |||||
Sbjct 4863 TTGTGGGGTGAATATGGCAGTAAAGATTTCAGGTGTACTGAAAGATGGGGCGGGTAAACC 4804
Query 19509 GGTACAGAACTGCACCATTCAGCTGAAAGCCAGACGTAACAGCACCACGGTGGTGG 19564
|| || || | ||| | ||| |||||| | | ||| | || || ||||
Sbjct 4803 TGTCGTAAATTGTGCGATTGAACTGCGGGCCAGAAGAACCAGTCCGACCGTTGTGG 4748
Score = 255 bits (282), Expect = 2e-63
Identities = 275/364 (76%), Gaps = 0/364 (0%)
Strand=Plus/Minus
Query 17898 CATGTGGGCTGTCAAAATTGAGCAGACCAAAGACGGCAAACATTATGTCGCGGGTATTGG 17957
|||||||||||| || | | |||| || ||||| | |||| | |||||||| ||
Sbjct 6394 CATGTGGGCTGTGAAGCTGCAACAGATGAAGGACGGACGCCTTTATATTGCGGGTATCGG 6335
Query 17958 CCTCAGCATGGAGGACACGGAGGAAGGCAAACTGAGCCAGTTTCTGGTTGCCGCCAATCG 18017
| | || ||| | ||| | ||| | | ||| ||| | ||| | || || | |
Sbjct 6334 TGCCGGTATTGAGAATACGCCAGCAGGAATGCAGAGTCAGGTGCTGCTGGCGGCAGACAG 6275
Query 18018 TATCGCATTTATTGACCCGGCAAACGGGAATGAAACGCCGATGTTTGTGGCGCAGGGCAA 18077
|| || | ||| | || || || || || || |||||||||||| | |||||| |
Sbjct 6274 GATTGCGATGATTAATCCTGCGAATGGCAACACAAAGCCGATGTTTGTTGGTCAGGGCGA 6215
Query 18078 CCAGATATTCATGAACGACGTGTTCCTGAAGCGCCTGACGGCCCCCACCATTACCAGCGG 18137
||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||
Sbjct 6214 TCAGATATTCATGAACGACGTGTTCCTGAAACGCCTGACGGCTCCGACCATTACCAGCGG 6155
Query 18138 CGGCAATCCTCCGGCCTTTTCCCTGACACCGGACGGAAAGCTGACCGCTAAAAATGCGGA 18197
||| ||||||||||| |||||||||||||| | |||| |||||| || |||||||| ||
Sbjct 6154 CGGTAATCCTCCGGCATTTTCCCTGACACCTGGCGGACGGCTGACGGCGAAAAATGCCGA 6095
Query 18198 TATCAGTGGCAGTGTGAATGCGAACTCCGGGACGCTCAGTAATGTGACGATAGCTGAAAA 18257
|||||| || | ||||| ||||||||||||||||||| || || ||||| | | ||
Sbjct 6094 TATCAGCGGTAACGTGAACGCGAACTCCGGGACGCTCAACAACGTCACGATTAATAAGAA 6035
Query 18258 CTGT 18261
||||
Sbjct 6034 CTGT 6031
>seq1137
Length=12692
Score = 96.9 bits (106), Expect = 1e-15
Identities = 153/213 (72%), Gaps = 11/213 (5%)
Strand=Plus/Minus
Query 45721 ATATTATCTGTGGCTAGATAGTAAATATAATGTG--AGACGTTGTGACGTTTTAGTTCAG 45778
|| ||||| || || ||||| ||||| ||||||| | ||| |||| |||||| ||| |
Sbjct 6208 ATGTTATCCGTAGCCAGATAATAAATGTAATGTGCAATACG--GTGATGTTTTAATTCTG 6151
Query 45779 AATAAAACAATTCACAGTCTAAATCTTTTCGCACTTGATCGAATATTTCTTTAAAAATGG 45838
|||||||| | ||| | ||||||| |||||| || || || | || |||||
Sbjct 6150 AATAAAACCAGGAGAAGTTTTGCTCTTTTCTCACTTGCTCAAACATCTTTTGAAAAACAA 6091
Query 45839 CAACCTGAGCCATTGG--TAA-AACCTTCCATGTGA--TACGAGGGCGCGTAGTTTGCAT 45893
| |||||| |||| | ||| ||||| | ||| | | ||| ||||||| ||||
Sbjct 6090 CGACCTGATCCATCAGGATAATAACCT--CTTGTTAGTTGTGAGACTGCGTAGTGTGCAC 6033
Query 45894 TATCGTTTTTATCGTTTCAATCTGGTCTGACCT 45926
|||| ||||| | |||||||||||||| |||
Sbjct 6032 GATCGGTTTTACCACTTCAATCTGGTCTGTCCT 6000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150558969171744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |