Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq2084 84.2 3e-11 >seq2084 Length=3937 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTACCAACT 35881 |||||| || | || |||||| | ||||||||||| ||||||||||||||||| ||| || Sbjct 2606 TGGAGATTAAGGGAATCGAACCCTTGACCCCCTGCTTGCAAAGCAGGTGCTCTCCCAGCT 2665 Query 35882 GAGCTAATTCCCCA 35895 ||||||| ||||| Sbjct 2666 GAGCTAAACCCCCA 2679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572024681773920