Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_021073.1
Length=107218
Score E
Sequences producing significant alignments: (Bits) Value
seq732 95.1 8e-15
>seq732
Length=24842
Score = 95.1 bits (104), Expect = 8e-15
Identities = 166/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 7309 CAAACTCCATTTGTAACATTTGGTTTTGGTTTGGGTACTACATGGCAAGCTCGTGAAATT 7368
|| || || |||||||| |||||||||||| |||| || | ||| || | || |||
Sbjct 212 CAGACGCCGTTTGTAACCTTTGGTTTTGGTCTGGGCACCAGCTGGGAATCGCGCCTGATT 271
Query 7369 CAGAAGGGAATTCTGAACACCCGCATCAGAGGTTTAGGTAAAGAAGGCCGAACAGCAATC 7428
||| | || ||| | ||| ||| ||| | |||||| | | ||| || |
Sbjct 272 CAGGAATCTATCCTGCGTAACCGTATCGCAGGCCTCGGTAAAAACCGTAAAACTGCGGTG 331
Query 7429 TTCCCTAAACTGGTATTCATGATGGATGATGATGTGAATGTTAAGCGTGGCGATCCGAAC 7488
||||| |||||||| || ||| |||| | |||| ||| ||||||||||||
Sbjct 332 TTCCCGAAACTGGTGTTTGCGATTCGCGATGGTCTGAACCATAAAAAAGGCGATCCGAAC 391
Query 7489 TACGACATCAAGAAACTGGCAATCAAGTGTGCATCCAAACGCAACTACCCAGATATCTTG 7548
||||||||||| | ||||| | |||| ||| ||| |||| || || |||||| ||
Sbjct 392 TACGACATCAAACAGCTGGCGCTGGAGTGCGCAAGCAAGCGCATGTATCCGGATATCCTG 451
Query 7549 AA 7550
||
Sbjct 452 AA 453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 342955427998964
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |