Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq732 95.1 8e-15 >seq732 Length=24842 Score = 95.1 bits (104), Expect = 8e-15 Identities = 166/242 (69%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 7309 CAAACTCCATTTGTAACATTTGGTTTTGGTTTGGGTACTACATGGCAAGCTCGTGAAATT 7368 || || || |||||||| |||||||||||| |||| || | ||| || | || ||| Sbjct 212 CAGACGCCGTTTGTAACCTTTGGTTTTGGTCTGGGCACCAGCTGGGAATCGCGCCTGATT 271 Query 7369 CAGAAGGGAATTCTGAACACCCGCATCAGAGGTTTAGGTAAAGAAGGCCGAACAGCAATC 7428 ||| | || ||| | ||| ||| ||| | |||||| | | ||| || | Sbjct 272 CAGGAATCTATCCTGCGTAACCGTATCGCAGGCCTCGGTAAAAACCGTAAAACTGCGGTG 331 Query 7429 TTCCCTAAACTGGTATTCATGATGGATGATGATGTGAATGTTAAGCGTGGCGATCCGAAC 7488 ||||| |||||||| || ||| |||| | |||| ||| |||||||||||| Sbjct 332 TTCCCGAAACTGGTGTTTGCGATTCGCGATGGTCTGAACCATAAAAAAGGCGATCCGAAC 391 Query 7489 TACGACATCAAGAAACTGGCAATCAAGTGTGCATCCAAACGCAACTACCCAGATATCTTG 7548 ||||||||||| | ||||| | |||| ||| ||| |||| || || |||||| || Sbjct 392 TACGACATCAAACAGCTGGCGCTGGAGTGCGCAAGCAAGCGCATGTATCCGGATATCCTG 451 Query 7549 AA 7550 || Sbjct 452 AA 453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342955427998964