Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_021190.1
Length=46150
Score E
Sequences producing significant alignments: (Bits) Value
seq1103 80.6 8e-11
>seq1103
Length=13301
Score = 80.6 bits (88), Expect = 8e-11
Identities = 77/99 (78%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 11683 CATCAACCAGTTTAAACGCCTGAAGGATGATCCGGTTAATGCAGTCACAACGCTCAACGA 11742
||| || |||||||| || |||||||||||||| || ||||| | | |||| || |
Sbjct 13301 CATAAATCAGTTTAAGCGGCTGAAGGATGATCCTGTAAATGCCGCGAAGGCGCTGGACAA 13242
Query 11743 TTCGCTGCATTTTCTGACGGCCACGCAGTATGAACAGAT 11781
| ||||||||||| |||| ||||| ||| ||| |||||
Sbjct 13241 TGCGCTGCATTTTTTGACTGCCACTCAGCTTGAGCAGAT 13203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 147551117624064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |