Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq1103 80.6 8e-11 >seq1103 Length=13301 Score = 80.6 bits (88), Expect = 8e-11 Identities = 77/99 (78%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 11683 CATCAACCAGTTTAAACGCCTGAAGGATGATCCGGTTAATGCAGTCACAACGCTCAACGA 11742 ||| || |||||||| || |||||||||||||| || ||||| | | |||| || | Sbjct 13301 CATAAATCAGTTTAAGCGGCTGAAGGATGATCCTGTAAATGCCGCGAAGGCGCTGGACAA 13242 Query 11743 TTCGCTGCATTTTCTGACGGCCACGCAGTATGAACAGAT 11781 | ||||||||||| |||| ||||| ||| ||| ||||| Sbjct 13241 TGCGCTGCATTTTTTGACTGCCACTCAGCTTGAGCAGAT 13203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147551117624064