Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_022071.1 Length=76129 Score E Sequences producing significant alignments: (Bits) Value seq1599 82.4 4e-11 >seq1599 Length=6876 Score = 82.4 bits (90), Expect = 4e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 64838 CTCGTTAGCTCAGTTGGTAGAGCAGCCGACTCTTAATCGGCGGGTCACAGGTTCAAGTCC 64897 |||||||||||||||||||||||| | |||| |||||| | ||||||| ||||| || || Sbjct 763 CTCGTTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGTCACTGGTTCGAGCCC 822 Query 64898 TGTACGGG 64905 ||||||| Sbjct 823 AGTACGGG 830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243475667028440