Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_023612.1
Length=39078
Score E
Sequences producing significant alignments: (Bits) Value
seq729 82.4 2e-11
>seq729
Length=25020
Score = 82.4 bits (90), Expect = 2e-11
Identities = 123/175 (70%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 29035 ATGAATAAAGTCATTTTAGTTGGACGTTTAACAAAAGACCCGGAATTACGTTACACACAA 29094
|| ||||| || | ||||||| ||||||||||| || || || ||||| ||||| |
Sbjct 1322 ATTAATAATGTTGTACTAGTTGGTCGTTTAACAAAGGATCCTGATTTACGCTACACCGCA 1263
Query 29095 AGCGGGGTGGCGGTTGCGACCTTTACATTGGCGGTCAACCGCCGCTTTACAAACCAACAA 29154
| || | ||||| || ||||| || || || || || ||||| || |||
Sbjct 1262 AATGGTACAGGTGTTGCCACGTTTACTTTAGCTGTGAATCGTAATTTTACGAATCAAAGC 1203
Query 29155 GGCGAGCGCGAGGCTGATTTTATCAATTGCCAAGTATGGCGTAAAGCGGCCGAAA 29209
|| | |||||||| |||||||||||||| | | ||||| ||| | || ||||
Sbjct 1202 GGGAATCGCGAGGCGGATTTTATCAATTGTGTAATTTGGCGGAAATCAGCAGAAA 1148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124921834490880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |