Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_023848.1
Length=163023
Score E
Sequences producing significant alignments: (Bits) Value
seq215 100 3e-16
>seq215
Length=85622
Score = 100 bits (110), Expect = 3e-16
Identities = 121/161 (75%), Gaps = 3/161 (2%)
Strand=Plus/Minus
Query 146415 CCGATTACAAGCACGGGGA-GCAAAACTTGTGCGAGACCATCATTAAGTTCGCGCAGGAT 146473
||| ||| | ||||| || |||| ||| || || || || || || || ||||| ||
Sbjct 41091 CCGCTTATCATCACGGCGAAGCAAGCCTTATGGGA-ACTATTATAAATTTGGCGCACGAC 41033
Query 146474 TTTGTGGGCAGCAATAATATCCCCCTTCT-CTACCAGATGGGCAATTCGGAACAAGGTTG 146532
|||||||||||||| || || ||| || || || | ||| |||||||| || | |||
Sbjct 41032 TTTGTGGGCAGCAACAACGTCAACCTACTGCTGCCTGTTGGCCAATTCGGTACTCGTTTG 40973
Query 146533 GAAGGAGGGAAGGACGCTGCAAGTCCCAGATATATTTTCAC 146573
|||| || ||||| ||||| ||| | ||||||||||||||
Sbjct 40972 CAAGGTGGCAAGGATGCTGCTAGTGCAAGATATATTTTCAC 40932
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521518505706080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |