Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq223 96.9 3e-15
>seq223
Length=82600
Score = 96.9 bits (106), Expect = 3e-15
Identities = 108/142 (76%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG- 133579
|| ||| | || | ||| ||||| || || ||||||||||||||||| ||| |||||
Sbjct 43496 CCGGCGAAGATCAACCGTTGCTGATCCGGGGGGATGCCTTCCTTGTC-CTGAATTTTTGC 43554
Query 133580 CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAG 133639
||| | | |||||||||||| | || ||||| || | || | ||||||||||| |
Sbjct 43555 CTTTACGTTCTCAACCGTGTCCGAAGGTTCCACTTCTAATGTTATTGTTTTGCCGGTTAA 43614
Query 133640 AGTTTTTACGAAAATCTGCATG 133661
||| || || ||||||||||||
Sbjct 43615 AGTCTTGACAAAAATCTGCATG 43636
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483395686289440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |