Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq194 109 1e-18
>seq194
Length=92744
Score = 109 bits (120), Expect = 1e-18
Identities = 153/215 (71%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 304886 TTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCT 304945
|| |||||||| | || || ||||| ||||||||||| |||| || | || |
Sbjct 7004 TTGCAATATCACGTGGCCACTTTAATTGATAATGAAATACCTGGGATACCTCGAGCTACG 6945
Query 304946 CAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGT 305005
|| | ||||||| | || || ||| | | |||| | ||||||| ||||| |||||
Sbjct 6944 CATAAATCTGGCCGGCCATTGAAGTCGCTAAAGCAAAGGCTTAAAGGCAAAGAAGGTCGC 6885
Query 305006 ATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCT 305065
||||||||||| || ||||||||| | |||||||| ||||| | ||| ||||| ||
Sbjct 6884 ATTCGAGGTAACCTTATGGGAAAAAGGGTTGATTTCTCAGCAAGGACTGTGATCACGCCC 6825
Query 305066 GATTCTCAAATTAGTCTTCATGAATTAGGAGTTCC 305100
||| | | || |||| | |||| || |||||
Sbjct 6824 GATCCCAATCTTGCTCTTGACCAATTGGGTGTTCC 6790
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186749603701916
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |