Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_025434.1
Length=62699
Score E
Sequences producing significant alignments: (Bits) Value
seq1066 116 1e-21
>seq1066
Length=13853
Score = 116 bits (128), Expect = 1e-21
Identities = 124/163 (76%), Gaps = 3/163 (2%)
Strand=Plus/Minus
Query 19220 CTGATGCGTGATATCCGGCAGGTTCTTGAGCGCTGGGGTGCATGGGCGGCAAATAACTAT 19279
|||||||||||||| | ||||||||| || ||||| ||||||| ||||||||| |
Sbjct 3056 CTGATGCGTGATATTCAAATGGTTCTTGAACGTTGGGGGGCATGGGTGGCAAATAATCAC 2997
Query 19280 GAGGATGTTACATGGTCGCCCATTGCTGCCGGATTTAAGGGACTGATCCCCGAAAAAGTA 19339
|||||||| |||||| | ||||||| || ||||||||| | ||||| ||||||
Sbjct 2996 GAGGATGTGGAATGGTCATCTGTTGCTGCAGGTTTTAAGGGATTAATCCCTTCGAAAGTA 2937
Query 19340 AAATCACGTCCACAGTGTTG---TGACGATGACGCGATGATTA 19379
||||| || || || ||| | |||||||| | ||| ||||
Sbjct 2936 AAATCCCGCCCGCAATGTAGCGATGACGATGGCCTGATCATTA 2894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200501843816560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |