Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq1478 80.6 8e-12
seq1293 80.6 8e-12
seq1167 80.6 8e-12
seq241 80.6 8e-12
>seq1478
Length=8064
Score = 80.6 bits (88), Expect = 8e-12
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||||||| |||||||| |||||||||||||||||| ||| ||||||||| |||||
Sbjct 5997 TAGCTCAGTAGGGAGAGCGTTAGACTGAAGATCTAAATGTCGCTGGTTCAATCCCGG 6053
>seq1293
Length=10179
Score = 80.6 bits (88), Expect = 8e-12
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||||||| |||||||| |||||||||||||||||| ||| ||||||||| |||||
Sbjct 1141 TAGCTCAGTAGGGAGAGCGTTAGACTGAAGATCTAAATGTCGCTGGTTCAATCCCGG 1197
>seq1167
Length=12199
Score = 80.6 bits (88), Expect = 8e-12
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||||||| |||||||| |||||||||||||||||| ||| ||||||||| |||||
Sbjct 3180 TAGCTCAGTAGGGAGAGCGTTAGACTGAAGATCTAAATGTCGCTGGTTCAATCCCGG 3236
>seq241
Length=76124
Score = 80.6 bits (88), Expect = 8e-12
Identities = 52/57 (91%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGG 2832
||||||||| |||||||| |||||||||||||||||| ||| ||||||||| |||||
Sbjct 16637 TAGCTCAGTAGGGAGAGCGTTAGACTGAAGATCTAAATGTCGCTGGTTCAATCCCGG 16693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848879536620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |