Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq77 93.3 3e-14
>seq77
Length=169284
Score = 93.3 bits (102), Expect = 3e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 41138 GGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACA 41197
|||||| || || || ||||||||||| |||||| ||||| | || |||||||| ||
Sbjct 43483 GGGACTTGGTGTACCATTTAACATAGCAAGTTATTCTCTGTTGACCCGCATGATTGCTCA 43542
Query 41198 CGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACAT 41257
|||||| |||| | |||| || ||| |||| |||||||| |||| || |||||| |
Sbjct 43543 TGTTACCGGTTTACGAGCTGGCGACTTTATTCATACGTTAGGCGATGCTCACATTTACGT 43602
Query 41258 TAATCA 41263
|| ||
Sbjct 43603 AAACCA 43608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397435868356780
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |