Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq77 93.3 3e-14 >seq77 Length=169284 Score = 93.3 bits (102), Expect = 3e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 41138 GGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACA 41197 |||||| || || || ||||||||||| |||||| ||||| | || |||||||| || Sbjct 43483 GGGACTTGGTGTACCATTTAACATAGCAAGTTATTCTCTGTTGACCCGCATGATTGCTCA 43542 Query 41198 CGTTACCAATTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACAT 41257 |||||| |||| | |||| || ||| |||| |||||||| |||| || |||||| | Sbjct 43543 TGTTACCGGTTTACGAGCTGGCGACTTTATTCATACGTTAGGCGATGCTCACATTTACGT 43602 Query 41258 TAATCA 41263 || || Sbjct 43603 AAACCA 43608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397435868356780