Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_027991.1
Length=147303
Score E
Sequences producing significant alignments: (Bits) Value
seq595 358 6e-94
>seq595
Length=34093
Score = 358 bits (396), Expect = 6e-94
Identities = 314/391 (80%), Gaps = 0/391 (0%)
Strand=Plus/Minus
Query 57689 ATGGCGCTCCAGTCTTCCCGACCGCGGCCTGCGGCCCGCGCCAGGTTATAAACTTCACGG 57748
|||||| |||||| | |||||||| || || || |||||| || ||||||| || ||
Sbjct 1493 ATGGCGGACCAGTCCTGGCGACCGCGACCCGCTGCGCGCGCCTGGCTATAAACCTCCCGT 1434
Query 57749 GAGGCGGCGCCGAGCGGCATCGGTACGTGCAGTTGATTGGCGACATCCAACGCGATGCCA 57808
|||||||| || |||||||| || || ||||| || ||||||||||| | |||||||||
Sbjct 1433 GAGGCGGCCCCCAGCGGCATTGGCACATGCAGCTGGTTGGCGACATCAAGGGCGATGCCA 1374
Query 57809 AGATCTTTGTGCGCCAGATCGATCATGAAGGCGGGAGACAGATCTCCTTTCATCACTTTA 57868
||||| || || || ||||||||||||||||||||||| |||||||| | | |||||
Sbjct 1373 AGATCCTTATGGGCAAGATCGATCATGAAGGCGGGAGAAAGATCTCCGCTGAGGACTTTG 1314
Query 57869 TTCGGCCAGGTGGTGGTGAAATGCCCTTTGCCTGCGGCAGTGCCGCTCATCACTTTTAAA 57928
|| ||||||| |||||||| || ||||| || ||||| || |||||||||||||| |
Sbjct 1313 TTTGGCCAGGAAGTGGTGAAGTGACCTTTACCGGCGGCGGTACCGCTCATCACTTTGACG 1254
Query 57929 GCCACGTCGAAGGAAAGCCCCAGCGCTTCACACAGCACGGCGGCTTCGGCGGAGAGCGCA 57988
|| || ||||||| ||| ||| ||||| |||| ||||||||||| || || ||||||
Sbjct 1253 GCAACATCGAAGGGAAGATTCAGGGCTTCGCACAAAACGGCGGCTTCTGCCGAAAGCGCA 1194
Query 57989 TTTAGCGCAATACTCATGTAGTTGTTGATCAGTTTTACGCGAATACCCATTCCCGGGCCG 58048
|| ||||| || ||||||||||||||||| || || ||||| || ||||| ||||| |||
Sbjct 1193 TTGAGCGCGATGCTCATGTAGTTGTTGATGAGCTTAACGCGGATCCCCATGCCCGGACCG 1134
Query 58049 CCGGTGTTGACCAGCTCATTACCCATCGGCA 58079
|| | ||||| || |||| | ||||||| ||
Sbjct 1133 CCAGCGTTGATCAACTCACTGCCCATCGCCA 1103
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471217118998880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |