Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_028896.1 Length=32675 Score E Sequences producing significant alignments: (Bits) Value seq1103 87.8 4e-13 >seq1103 Length=13301 Score = 87.8 bits (96), Expect = 4e-13 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 8021 TCGTCTGTTGCCATATTCAGCCTGACAGCGCGTTCCAGCGGCTGGATGACTGATTCAGCT 8080 || || ||| || | |||||||||||||| || || ||||| ||||||| || || ||| Sbjct 2752 TCATCCGTTTCCCTGTTCAGCCTGACAGCACGCCCCGGCGGCCGGATGACAGACTCCGCT 2811 Query 8081 TCGGAAAGCAATGCGGCCTTTTGTAATTCGGCCTGTTG 8118 |||| |||||| |||| ||| ||| |||| ||| |||| Sbjct 2812 TCGGTAAGCAAAGCGGTCTTCTGTGATTCCGCCAGTTG 2849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104433245703864