Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_028896.1
Length=32675
Score E
Sequences producing significant alignments: (Bits) Value
seq1103 87.8 4e-13
>seq1103
Length=13301
Score = 87.8 bits (96), Expect = 4e-13
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 8021 TCGTCTGTTGCCATATTCAGCCTGACAGCGCGTTCCAGCGGCTGGATGACTGATTCAGCT 8080
|| || ||| || | |||||||||||||| || || ||||| ||||||| || || |||
Sbjct 2752 TCATCCGTTTCCCTGTTCAGCCTGACAGCACGCCCCGGCGGCCGGATGACAGACTCCGCT 2811
Query 8081 TCGGAAAGCAATGCGGCCTTTTGTAATTCGGCCTGTTG 8118
|||| |||||| |||| ||| ||| |||| ||| ||||
Sbjct 2812 TCGGTAAGCAAAGCGGTCTTCTGTGATTCCGCCAGTTG 2849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 104433245703864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |