Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_028940.1 Length=170286 Score E Sequences producing significant alignments: (Bits) Value seq1066 82.4 8e-11 >seq1066 Length=13853 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 75474 TTGGTGACCCTTGCCGGATTCGAACCAGCGACCGAGCAATTATGAGTTGCCTGCTCT-AC 75532 |||||| ||||||| ||| | |||||||||||| || ||||||||| || ||||| || Sbjct 183 TTGGTGGCCCTTGCTGGACTTGAACCAGCGACCTGGCGATTATGAGTCGCTCGCTCTCAC 242 Query 75533 CTCTGAGCTAAAGGGCC 75549 | ||||||||||||||| Sbjct 243 CACTGAGCTAAAGGGCC 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544758898304960