Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_028984.1
Length=30664
Score E
Sequences producing significant alignments: (Bits) Value
seq729 150 4e-32
>seq729
Length=25020
Score = 150 bits (166), Expect = 4e-32
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 27879 TTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTC 27938
||||| | || || || |||||||||| ||||||| || | || || || |||||
Sbjct 1241 TTTACTTTAGCTGTGAATCGTAATTTTACGAATCAAAGCGGGAATCGCGAGGCGGATTTT 1182
Query 27939 ATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGG 27998
|| ||| || |||||||| | ||| |||| ||||||||| | || |||||
Sbjct 1181 ATCAATTGTGTAATTTGGCGGAAATCAGCAGAAACTTTAGCTAATTATGCGCGCAAAGGA 1122
Query 27999 ACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAACAAGGTCAG 28058
||||||||||| | ||||| || || || || | ||||||||||| || ||||| ||
Sbjct 1121 ACTCTTTTAGGTGTGACTGGCCGTATCCAAACAAGAAATTATGAAAATCAGCAAGGGCAA 1062
Query 28059 CGTGTTTACGTCACAGAAGTTGTTGCGGATAATTTCCAAATTTTGGAA 28106
||||| || || |||||||||||||| || ||||||||| | ||||||
Sbjct 1061 CGTGTCTATGTGACAGAAGTTGTTGCTGAGAATTTCCAATTATTGGAA 1014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97998363297072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |