Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_029030.1
Length=31075
Score E
Sequences producing significant alignments: (Bits) Value
seq729 163 6e-36
>seq729
Length=25020
Score = 163 bits (180), Expect = 6e-36
Identities = 173/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 28704 TTTACGCTTGCGGTTAACCGTAATTTTAAAAATCAAAATGGTGAACGTGAAGCTGATTTC 28763
||||| | || || || |||||||||| ||||||| || | || || || |||||
Sbjct 1241 TTTACTTTAGCTGTGAATCGTAATTTTACGAATCAAAGCGGGAATCGCGAGGCGGATTTT 1182
Query 28764 ATTAATATCGTGATTTGGCGTCAGCAAGCTGAAAATTTAGCTAACTGGGCTAAAAAAGGG 28823
|| ||| || |||||||| | ||| |||| ||||||||| | || |||||
Sbjct 1181 ATCAATTGTGTAATTTGGCGGAAATCAGCAGAAACTTTAGCTAATTATGCGCGCAAAGGA 1122
Query 28824 ACTCTTTTAGGCATTACTGGTCGAATTCAGACCCGCAATTATGAAAACCAGCAAGGACAG 28883
||||||||||| | ||||| || || || || | ||||||||||| |||||||| ||
Sbjct 1121 ACTCTTTTAGGTGTGACTGGCCGTATCCAAACAAGAAATTATGAAAATCAGCAAGGGCAA 1062
Query 28884 CGTGTTTATGTTACAGAAGTTGTTGCGGATAATTTCCAATTTTTGGAA 28931
||||| ||||| |||||||||||||| || ||||||||||| ||||||
Sbjct 1061 CGTGTCTATGTGACAGAAGTTGTTGCTGAGAATTTCCAATTATTGGAA 1014
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 99313498388664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |