Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26]
4,156 sequences; 75,496,394 total letters
Query= NC_029120.1
Length=60875
Score E
Sequences producing significant alignments: (Bits) Value
seq1066 122 3e-23
>seq1066
Length=13853
Score = 122 bits (134), Expect = 3e-23
Identities = 125/163 (77%), Gaps = 3/163 (2%)
Strand=Plus/Minus
Query 19231 CTGATGCGTGATATCCGGCAGGTTCTTGAGCGCTGGGGTGCATGGGCGGCAAATAACTAT 19290
|||||||||||||| | ||||||||| || ||||| ||||||| ||||||||| |
Sbjct 3056 CTGATGCGTGATATTCAAATGGTTCTTGAACGTTGGGGGGCATGGGTGGCAAATAATCAC 2997
Query 19291 GAGGATGTTACATGGTCGCCCATTGCTGCAGGATTTAAGGGACTGATCCCCGAAAAAGTA 19350
|||||||| |||||| | |||||||||| ||||||||| | ||||| ||||||
Sbjct 2996 GAGGATGTGGAATGGTCATCTGTTGCTGCAGGTTTTAAGGGATTAATCCCTTCGAAAGTA 2937
Query 19351 AAATCACGTCCACAGTGTTG---TGACGATGACGCGATGATTA 19390
||||| || || || ||| | |||||||| | ||| ||||
Sbjct 2936 AAATCCCGCCCGCAATGTAGCGATGACGATGGCCTGATCATTA 2894
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194668792134264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |