Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichuris_20trichiura_20[genbank_20GCA_5F000613005.1_202014-03-26] 4,156 sequences; 75,496,394 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq544 86.0 1e-11 >seq544 Length=37415 Score = 86.0 bits (94), Expect = 1e-11 Identities = 68/79 (86%), Gaps = 2/79 (3%) Strand=Plus/Minus Query 2621 TTAGGGAAGTAGTTCAATTGGTAGAGCGTCGGTCTCCAAAACCGGTTGTTGGAGGTTCGA 2680 |||||| ||||||||||||||||||| |||||||||||||||| |||||| |||||| Sbjct 36896 TTAGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGA 36837 Query 2681 GTC-CTCTCTTCCCTGCCA 2698 ||| ||| | |||||||| Sbjct 36836 GTCTCTC-CGCCCCTGCCA 36819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788279046776000